RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CD9P21926 228 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 ROR1Q01973 937 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 FPGSQ05932 587 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 KLC1Q07866 573 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 PTK6Q13882 451 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 OASLQ15646 514 aaKnown RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 ARL13BQ3SXY8 428 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 SLC44A4Q53GD3 710 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 SLC8B1Q6J4K2 584 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 PSTKQ8IV42 348 aaKnown RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 SLC39A11Q8N1S5 342 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 PYROXD2Q8N2H3 581 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 CCDC89Q8N998 374 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 C2orf15Q8WU43 125 aaKnown RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 CAVIN3Q969G5 261 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 RNF34Q969K3 372 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 KCTD15Q96SI1 283 aaPredicted RBP10.65□□□□□ -0.7
HERC4-207ENST00000460168 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 TMEM121Q9BTD3 319 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 MAGEB5Q9BZ81 275 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 ABCG4Q9H172 646 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 NEUROG2Q9H2A3 272 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 WDCPQ9H6R7 721 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 HEY1Q9Y5J3 304 aa10.65□□□□□ -0.7
HERC4-207ENST00000460168 CARNS1A5YM72 827 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ZNF487B1APH4 448 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 M0QX08 132 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ADAM12O43184 909 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 CSPG5O95196 566 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 EFEMP2O95967 443 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 IFNB1P01574 187 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 KRT14P02533 472 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ITGAVP06756 1048 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ATF2P15336 505 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ADCY8P40145 1251 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 GLUD2P49448 558 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 AIF1P55008 147 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 MTTPP55157 894 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 EIF3EP60228 445 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 NNTQ13423 1086 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 FAM209AQ5JX71 171 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 TTC39BQ5VTQ0 682 aaPredicted RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 NPNTQ6UXI9 565 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 C16orf59Q7L2K0 433 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 TAC4Q86UU9 113 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ZC3H18Q86VM9 953 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 MON1AQ86VX9 555 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ARHGAP18Q8N392 663 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 PCDH19Q8TAB3 1148 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 FBXO25Q8TCJ0 367 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 DQX1Q8TE96 717 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 RNF139Q8WU17 664 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 MAML1Q92585 1016 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 DPF3Q92784 378 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 NKD2Q969F2 451 aaPredicted RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 CSPG4P5Q96PW8 444 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 DRC3Q9H069 523 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 WDR6Q9NNW5 1121 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 ABCF3Q9NUQ8 709 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 SCML2Q9UQR0 700 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 DRG1Q9Y295 367 aaKnown RBP10.65□□□□□ -0.71
HERC4-207ENST00000460168 BACE2Q9Y5Z0 518 aa10.65□□□□□ -0.71
HERC4-207ENST00000460168 A0A1W2PQH9 124 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 A6NNZ2 444 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 GJB5O95377 273 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 URODP06132 367 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 GOT1P17174 413 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 TGM2P21980 687 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 YWHAQP27348 245 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 ADRA1BP35368 520 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PPM1AP35813 382 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 IRAK1P51617 712 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 USP46P62068 366 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 RPL10AP62906 217 aaKnown RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
HERC4-207ENST00000460168 LAPTM5Q13571 262 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 DPYSQ14117 519 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 BEND5Q7L4P6 421 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 NLRP9Q7RTR0 991 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 ALLCQ8N6M5 410 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PQLC3Q8N755 202 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 PLD5Q8N7P1 536 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 RSAD2Q8WXG1 361 aa10.64□□□□□ -0.71
HERC4-207ENST00000460168 FBXO32Q969P5 355 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms