RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 TPM3P06753 285 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 GNSP15586 552 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 ITPKAP23677 461 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 PTPN9P43378 593 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 KRT83P78385 493 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 IRX4P78413 519 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 ASIC2Q16515 512 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 DUOXA1Q1HG43 343 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 TRIM61Q5EBN2 209 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 C6orf118Q5T5N4 469 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 SFMBT2Q5VUG0 894 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 OTUD1Q5VV17 481 aaPredicted RBP18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 ZNF776Q68DI1 518 aaPredicted RBP18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 STRADAQ7RTN6 431 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 C3orf20Q8ND61 904 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 IGSF8Q969P0 613 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 IQCDQ96DY2 449 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 TOE1Q96GM8 510 aaKnown RBP18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 PCED1AQ9H1Q7 454 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 CBX8Q9HC52 389 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 TMEM74BQ9NUR3 256 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 WSB2Q9NYS7 404 aaPredicted RBP18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 VPS28Q9UK41 221 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 INTS6Q9UL03 887 aaKnown RBP18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 NCKAP1Q9Y2A7 1128 aa18.04■□□□□ 0.48
SCARNA2-201ENST00000458748 GON4LQ3T8J9 2241 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 FAM170AA1A519 330 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 MEI4A8MW99 385 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 PATE3B3GLJ2 98 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 ENDOD1O94919 500 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 ATP11AP98196 1134 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 DAB2IPQ5VWQ8 1189 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 DNAJC24Q6P3W2 148 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 SETD3Q86TU7 594 aaPredicted RBP18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 SLC41A1Q8IVJ1 513 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 RGL4Q8IZJ4 473 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 RXFP2Q8WXD0 754 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 VCPIP1Q96JH7 1222 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 HSPA12BQ96MM6 686 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 PCDHB18PQ96TA0 734 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 MUC3BQ9H195 1237 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 RETREG1Q9H6L5 497 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 TMEM9BQ9NQ34 198 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 TBC1D30Q9Y2I9 924 aa18.03■□□□□ 0.48
SCARNA2-201ENST00000458748 ITIH6Q6UXX5 1313 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 LRRC53A6NM62 1247 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 SIGLEC16A6NMB1 481 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 RHOCP08134 193 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 SERPINF2P08697 491 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 TFE3P19532 575 aaPredicted RBP18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 NR1I3Q14994 352 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 FIGNQ5HY92 759 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 ACAD10Q6JQN1 1059 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 CXorf57Q6NSI4 855 aaKnown RBP18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 BNIPLQ7Z465 357 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 IRF2BP2Q7Z5L9 587 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 DSG4Q86SJ6 1040 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 LUZP1Q86V48 1076 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 CIR1Q86X95 450 aaPredicted RBP18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 FAM131BQ86XD5 332 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 APCDD1Q8J025 514 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 DEFB119Q8N690 84 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 EMC1Q8N766 993 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 ZNF366Q8N895 744 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 MRGPRX3Q96LB0 322 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 FEM1AQ9BSK4 669 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 C2orf49Q9BVC5 232 aaPredicted RBP18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 RSPH9Q9H1X1 276 aaPredicted RBP18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 CD93Q9NPY3 652 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 SLC6A14Q9UN76 642 aa18.02■□□□□ 0.48
SCARNA2-201ENST00000458748 EPG5Q9HCE0 2579 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 C2CD4BA6NLJ0 364 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 DRGXA6NNA5 263 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 C4orf47A7E2U8 309 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 E9PAM4 449 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 SRGAP2O75044 1071 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 CFIP05156 583 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 GPD1P21695 349 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 VASPP50552 380 aaPredicted RBP18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 ATXN3P54252 364 aaPredicted RBP18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 UBASH3AP57075 661 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 RPS14P62263 151 aaKnown RBP18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 FANCCQ00597 558 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 GFPT1Q06210 699 aaPredicted RBP18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 PTP4A2Q12974 167 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 CDO1Q16878 200 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 CCDC14Q49A88 953 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 DCUN1D2Q6PH85 259 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 ZNF783Q6ZMS7 281 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 USP30Q70CQ3 517 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 MON1BQ7L1V2 547 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 C14orf80Q86SX3 495 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 CACUL1Q86Y37 369 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 GANCQ8TET4 914 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 BAP1Q92560 729 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 MYO19Q96H55 970 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 NAP1L5Q96NT1 182 aaPredicted RBP18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
SCARNA2-201ENST00000458748 ZYG11BQ9C0D3 744 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms