RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FIGNQ5HY92 759 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 LYSMD4Q5XG99 296 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 PRR23CQ6ZRP0 262 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 ARCQ7LC44 396 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 SYT11Q9BT88 431 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 PRSS16Q9NQE7 514 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
USP39-209ENST00000458268 SLCO3A1Q9UIG8 710 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 DOCK4Q8N1I0 1966 aa19.22■□□□□ 0.67
USP39-209ENST00000458268 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 A0A1W2PQJ5 194 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 SIN3BO75182 1162 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 FTLP02792 175 aaPredicted RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 DNTTP04053 509 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 PLEKP08567 350 aaPredicted RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 PSMA2P25787 234 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 PRKCIP41743 596 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 OXCT1P55809 520 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 HDAC4P56524 1084 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 GSCP56915 257 aaPredicted RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 ZBED6P86452 979 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 CAMK2GQ13555 558 aaPredicted RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 SLC12A1Q13621 1099 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 CSRP2Q16527 193 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 PPP1R2P3Q6NXS1 205 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 SLC36A4Q6YBV0 504 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 STRADAQ7RTN6 431 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 VPS36Q86VN1 386 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 RGL4Q8IZJ4 473 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 MRGPRX3Q96LB0 322 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 HSPA12BQ96MM6 686 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 HAPLN3Q96S86 360 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 SPON2Q9BUD6 331 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 GPR174Q9BXC1 333 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 WDR87Q6ZQQ6 2873 aa19.21■□□□□ 0.67
USP39-209ENST00000458268 TNRC6BQ9UPQ9 1833 aaKnown RBP19.21■□□□□ 0.67
USP39-209ENST00000458268 BCLAF3A2AJT9 711 aaKnown RBP19.2■□□□□ 0.66
USP39-209ENST00000458268 MEI4A8MW99 385 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 RTN2O75298 545 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 ENDOD1O94919 500 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 GYPCP04921 128 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 KCNA4P22459 653 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 CD6P30203 668 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 OR1E1P30953 314 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 ADRA1BP35368 520 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 ID4P47928 161 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 TPMTP51580 245 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 LMNB2Q03252 620 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 RSPO4Q2I0M5 234 aaPredicted RBP19.2■□□□□ 0.66
USP39-209ENST00000458268 ZNF776Q68DI1 518 aaPredicted RBP19.2■□□□□ 0.66
USP39-209ENST00000458268 BNIPLQ7Z465 357 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 OR7D4Q8NG98 312 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 SNX19Q92543 992 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 TOE1Q96GM8 510 aaKnown RBP19.2■□□□□ 0.66
USP39-209ENST00000458268 MYO19Q96H55 970 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 FEM1AQ9BSK4 669 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 ZYG11BQ9C0D3 744 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 PARVAQ9NVD7 372 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 OR12D3Q9UGF7 316 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 CDV3Q9UKY7 258 aaKnown RBP19.2■□□□□ 0.66
USP39-209ENST00000458268 CAPN11Q9UMQ6 739 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.2■□□□□ 0.66
USP39-209ENST00000458268 GON4LQ3T8J9 2241 aa19.2■□□□□ 0.66
USP39-209ENST00000458268 EDDM13A0A1B0GTR0 161 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 PATE3B3GLJ2 98 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 GDF9O60383 454 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 SNAP91O60641 907 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 RNASEH1O60930 286 aaKnown RBP19.19■□□□□ 0.66
USP39-209ENST00000458268 LRP3O75074 770 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 SERPING1P05155 500 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 SRPRAP08240 638 aaKnown RBP19.19■□□□□ 0.66
USP39-209ENST00000458268 VAV1P15498 845 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 TGM1P22735 817 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ITPKAP23677 461 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 PSMD8P48556 350 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ZNF143P52747 638 aaPredicted RBP19.19■□□□□ 0.66
USP39-209ENST00000458268 OGDHQ02218 1023 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 SULT2A1Q06520 285 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 HNRNPA1L2Q32P51 320 aaKnown RBP19.19■□□□□ 0.66
USP39-209ENST00000458268 EFHC2Q5JST6 749 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 C6orf118Q5T5N4 469 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 TMC6Q7Z403 805 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 SLFN11Q7Z7L1 901 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ZNF354CQ86Y25 554 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ZNF683Q8IZ20 524 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 PYROXD2Q8N2H3 581 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 PPP1R9BQ96SB3 815 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 CNPY3Q9BT09 278 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 VPS45Q9NRW7 570 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 TMEM51Q9NW97 253 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ADAMTS1Q9UHI8 967 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 PCDHGA5Q9Y5G8 931 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 ZNF292O60281 2723 aa19.19■□□□□ 0.66
USP39-209ENST00000458268 TCRBV5S1A1TA0A578 114 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 DRGXA6NNA5 263 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 FAM72CH0Y354 149 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 CREB3O43889 395 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms