RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 ASIC3Q9UHC3 531 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 MAFFQ9ULX9 164 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 HBS1LQ9Y450 684 aaKnown RBP8.98□□□□□ -0.97
RIF1-208ENST00000457745 DENND4AQ7Z401 1863 aa8.98□□□□□ -0.97
RIF1-208ENST00000457745 CCDC195A0A1B0GUA6 201 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 CARNS1A5YM72 827 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 WASH4PA8MWX3 477 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 J3KR12 359 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 RNF103O00237 685 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 DNALI1O14645 258 aaPredicted RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 MCF2LO15068 1137 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 APOEP02649 317 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 HDCP19113 662 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 PTPN3P26045 913 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 CETN2P41208 172 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 GRIA1P42261 906 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 HLTFQ14527 1009 aaKnown RBP eCLIP8.97□□□□□ -0.97
RIF1-208ENST00000457745 FASTKD3Q14CZ7 662 aaKnown RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 TAF12Q16514 161 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 ARL13BQ3SXY8 428 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 GPR158Q5T848 1215 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 SYCE2Q6PIF2 218 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 TMCO3Q6UWJ1 677 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 MAATS1Q7Z4T9 603 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 ITIH5Q86UX2 942 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 BBS7Q8IWZ6 715 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 IFT20Q8IY31 132 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 CNTD1Q8N815 330 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 ATP6V0D2Q8N8Y2 350 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 TTC16Q8NEE8 873 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 OR7D4Q8NG98 312 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 USP13Q92995 863 aaPredicted RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 HMCESQ96FZ2 354 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 BTN2A3PQ96KV6 586 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 C1orf74Q96LT6 269 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 SAMD11Q96NU1 681 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 MLPHQ9BV36 600 aaPredicted RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 BRD8Q9H0E9 1235 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 IGFLR1Q9H665 355 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 PLAC1Q9HBJ0 212 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 MSRAQ9UJ68 235 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 ASB3Q9Y575 518 aa8.97□□□□□ -0.97
RIF1-208ENST00000457745 ZFP37Q9Y6Q3 630 aaPredicted RBP8.97□□□□□ -0.97
RIF1-208ENST00000457745 A0A0D9SEW6 157 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 ANTXRLA6NF34 631 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 H3BQF6 201 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 GOLGA8MH3BSY2 632 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 AGPSO00116 658 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 DFFAO00273 331 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 LEFTY2O00292 366 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 MAP2K7O14733 419 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 MUSKO15146 869 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 MAFKO60675 156 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 TBX10O75333 385 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 PAPLNO95428 1278 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 RHOQP17081 205 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 HOXD9P28356 352 aaPredicted RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 ADCY8P40145 1251 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 GARSP41250 739 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 PAPOLAP51003 745 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 DRG2P55039 364 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 SLC7A9P82251 487 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 PPIDQ08752 370 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 XRCC4Q13426 336 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 SPARCL1Q14515 664 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 KCNJ11Q14654 390 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 RAB30Q15771 203 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 CLUL1Q15846 466 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 FSCBQ5H9T9 825 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 HP1BP3Q5SSJ5 553 aaPredicted RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 FNBP1LQ5T0N5 605 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 RARS2Q5T160 578 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 CXorf57Q6NSI4 855 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 OTOP3Q7RTS5 596 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 GSTA5Q7RTV2 222 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 TMC3Q7Z5M5 1100 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 IGDCC3Q8IVU1 814 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 CDKL3Q8IVW4 592 aaPredicted RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 FAM217AQ8IXS0 508 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 CCDC13Q8IYE1 715 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 ZNF567Q8N184 647 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 PGBD5Q8N414 524 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 NAT8LQ8N9F0 302 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 OR2W6PQ8NHA6 318 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 SH3RF2Q8TEC5 729 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 HNRNPLLQ8WVV9 542 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 HTR3CQ8WXA8 447 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 SMG7Q92540 1137 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 BHMTQ93088 406 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 CAVIN3Q969G5 261 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 PLD4Q96BZ4 506 aa8.96□□□□□ -0.98
RIF1-208ENST00000457745 KCTD12Q96CX2 325 aaKnown RBP8.96□□□□□ -0.98
RIF1-208ENST00000457745 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms