RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ME2P23368 584 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 IL4RP24394 825 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIK3R1P27986 724 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PEX2P28328 305 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NOS2P35228 1153 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CPOXP36551 454 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 GNL1P36915 607 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAGEA12P43365 314 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 BAG6P46379 1132 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 HCAR3P49019 387 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 RPS6KA3P51812 740 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRLP54845 237 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AQP4P55087 323 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MTTPP55157 894 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 STX1BP61266 288 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FOLH1Q04609 750 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 BTKQ06187 659 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CDH17Q12864 832 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLF10Q13118 480 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 STX5Q13190 355 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TUBB3Q13509 450 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 LAMB3Q13751 1172 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCNIQ14094 377 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADGRE1Q14246 886 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRM2Q14416 872 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP10Q14694 798 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 RFTN1Q14699 578 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 R3HDM1Q15032 1099 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PAFAH1B3Q15102 231 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSMD5Q16401 504 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AMHR2Q16671 573 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC10A6Q3KNW5 377 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSDL1Q3SXM5 330 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PKDCCQ504Y2 493 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 RALGPS1Q5JS13 557 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FBXO47Q5MNV8 452 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TCHHL1Q5QJ38 904 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 OGFRL1Q5TC84 451 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SH3PXD2AQ5TCZ1 1133 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAP1SQ66K74 1059 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRNP1Q6NT89 227 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DPY19L2Q6NUT2 758 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PMF1Q6P1K2 205 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLC3Q6P597 504 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PGM2L1Q6PCE3 622 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 EPGNQ6UW88 154 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZYG11AQ6WRX3 759 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 B3GNT6Q6ZMB0 384 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP4V2Q6ZWL3 525 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FASTKD5Q7L8L6 764 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCNMB4Q86W47 210 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TTC30AQ86WT1 665 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM131BQ86XD5 332 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNX32Q86XE0 403 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SCUBE3Q8IX30 993 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KBTBD2Q8IY47 623 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM192Q8IY95 271 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALDH16A1Q8IZ83 802 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PGAM4Q8N0Y7 254 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DEFB106AQ8N104 65 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AHI1Q8N157 1196 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PQLC1Q8N2U9 271 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MPP5Q8N3R9 675 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MARVELD2Q8N4S9 558 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TOP6BLQ8N6T0 577 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC185Q8N715 623 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNTD1Q8N815 330 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 C12orf29Q8N999 325 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 HIPK4Q8NE63 616 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SHCBP1Q8NEM2 672 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPTC7Q8NI37 304 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CXorf38Q8TB03 319 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 URGCPQ8TCY9 931 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CALML6Q8TD86 181 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDCD6IPQ8WUM4 868 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NAT14Q8WUY8 206 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTCD2Q8WV60 388 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC35F5Q8WV83 523 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRAPPC12Q8WVT3 735 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NCSTNQ92542 709 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 KAT6AQ92794 2004 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 WNT8BQ93098 351 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TOP1MTQ969P6 601 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NTAN1Q96AB6 310 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 OPTNQ96CV9 577 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DGCR14Q96DF8 476 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC126Q96EE4 140 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 IFT43Q96FT9 208 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSPAN17Q96FV3 270 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 P2RY11Q96G91 374 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCUN1D1Q96GG9 259 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIWIL1Q96J94 861 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 HIC2Q96JB3 615 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF668Q96K58 619 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNDP1Q96KN2 507 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNX27Q96L92 541 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TUBGCP5Q96RT8 1024 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC9A7Q96T83 725 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SORT1Q99523 831 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms