RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 LMNB2Q03252 620 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 RAB6CQ53S08 254 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 C6orf118Q5T5N4 469 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 E4F1Q66K89 784 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 CXorf57Q6NSI4 855 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 RWDD4Q6NW29 188 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 BNIPLQ7Z465 357 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 TFAP2DQ7Z6R9 452 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 SLFN11Q7Z7L1 901 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 METTL3Q86U44 580 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 GANCQ8TET4 914 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 PIGKQ92643 395 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 CENPIQ92674 756 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 TRIM11Q96F44 468 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 FEM1AQ9BSK4 669 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 CNPY3Q9BT09 278 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 ZYG11BQ9C0D3 744 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 RAB6CQ9H0N0 254 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 PARD6AQ9NPB6 346 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 ITM2CQ9NQX7 267 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 VPS45Q9NRW7 570 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 CNOT8Q9UFF9 292 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
PDLIM2-215ENST00000456545 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.57
PDLIM2-215ENST00000456545 ABCA7Q8IZY2 2146 aa18.58■□□□□ 0.57
PDLIM2-215ENST00000456545 ITIH6Q6UXX5 1313 aa18.58■□□□□ 0.57
PDLIM2-215ENST00000456545 FAM186AA6NE01 2351 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 IGHV1OR15-9A0A0B4J2B8 117 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 TTC34A8MYJ7 566 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 PRR5-ARHGAP8B1AHC4 643 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 I6L893 689 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 DDX3XO00571 662 aaKnown RBP eCLIP18.58■□□□□ 0.569e-11■■■■■ 33.8
PDLIM2-215ENST00000456545 CCP110O43303 1012 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 CD6P30203 668 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 CASP14P31944 242 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 COPAP53621 1224 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 HNRNPA1L2Q32P51 320 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 AASDHQ4L235 1098 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 ALFQ53S48 1182 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 SPDYCQ5MJ68 293 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 SETD3Q86TU7 594 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF653Q96CK0 615 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 OSBPL2Q9H1P3 480 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 MTG2Q9H4K7 406 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 MRPL47Q9HD33 250 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 SLCO3A1Q9UIG8 710 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 TBC1D30Q9Y2I9 924 aa18.58■□□□□ 0.56
PDLIM2-215ENST00000456545 RIF1Q5UIP0 2472 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 EDDM13A0A1B0GTR0 161 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 BCLAF3A2AJT9 711 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 TARSL2A2RTX5 802 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 ATMINO43313 823 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 PLEKP08567 350 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF806P0C7X5 589 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 MYBL1P10243 752 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 PSMA2P25787 234 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 TPMTP51580 245 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 HDAC4P56524 1084 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 SFSWAPQ12872 951 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 MAMLD1Q13495 774 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 TRIM14Q14142 442 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 EFHC2Q5JST6 749 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF776Q68DI1 518 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 SPECC1LQ69YQ0 1117 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 PRR23CQ6ZRP0 262 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 TMC6Q7Z403 805 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 FAM124AQ86V42 546 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 DNAAF5Q86Y56 855 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 TOE1Q96GM8 510 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 MRGPRX3Q96LB0 322 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 SPON2Q9BUD6 331 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 C2orf49Q9BVC5 232 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNHIT6Q9NWK9 470 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 PPARGC1AQ9UBK2 798 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 NCKAP1Q9Y2A7 1128 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 SCINQ9Y6U3 715 aa18.57■□□□□ 0.56
PDLIM2-215ENST00000456545 IGLV3-10A0A075B6K4 115 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 TCRBV5S1A1TA0A578 114 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 SIN3BO75182 1162 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 RNF8O76064 485 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 GYPCP04921 128 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 SDHBP21912 280 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 TGM1P22735 817 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 DPP6P42658 865 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 STK19P49842 368 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF33AQ06730 810 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 TTC31Q49AM3 519 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 PPP1R15BQ5SWA1 713 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 SYCP2LQ5T4T6 812 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 PLEKHA7Q6IQ23 1121 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 DRC7Q8IY82 874 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF683Q8IZ20 524 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 RGL4Q8IZJ4 473 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 CCDC185Q8N715 623 aa18.56■□□□□ 0.56
PDLIM2-215ENST00000456545 NTAN1Q96AB6 310 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms