RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SNX11Q9Y5W9 270 aa13.36□□□□□ -0.27
TREX1-203ENST00000456089 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 H0Y626 953 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 MID1O15344 667 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 GRAP2O75791 330 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 LSM8O95777 96 aaKnown RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 CER1O95813 267 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 TRUB2O95900 331 aaKnown RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 ZNF18P17022 549 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 TACR2P21452 398 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 SOX5P35711 763 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 ST8SIA6P61647 398 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 IL9RQ01113 521 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 NNTQ13423 1086 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 MPP7Q5T2T1 576 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 DPY19L2P1Q6NXN4 242 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 WDTC1Q8N5D0 677 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 ZNF557Q8N988 423 aaPredicted RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 C18orf8Q96DM3 657 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 RSPH9Q9H1X1 276 aaPredicted RBP13.35□□□□□ -0.27
TREX1-203ENST00000456089 GANQ9H2C0 597 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 SUN2Q9UH99 717 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 PCOLCE2Q9UKZ9 415 aa13.35□□□□□ -0.27
TREX1-203ENST00000456089 A0A1W2PP55 124 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 SYCE3A1L190 88 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 LRRC10BA6NIK2 292 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 SRRM3A6NNA2 597 aaPredicted RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 ERBB2P04626 1255 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 IGHV4-34P06331 123 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 CCDC172P0C7W6 258 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 SLC2A3P11169 496 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 VAV1P15498 845 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 ABCB4P21439 1286 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 GGCXP38435 758 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 PSMD8P48556 350 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 IRAK1P51617 712 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 AFF3P51826 1226 aaKnown RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 CENPCQ03188 943 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 NCAPHQ15003 741 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 ZNF423Q2M1K9 1284 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 HNRNPA1L2Q32P51 320 aaKnown RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 TTC31Q49AM3 519 aaPredicted RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 C9orf64Q5T6V5 341 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 DEFB106AQ8N104 65 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 ATP6V0D2Q8N8Y2 350 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 ORAI3Q9BRQ5 295 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 PABPC3Q9H361 631 aaKnown RBP13.34□□□□□ -0.27
TREX1-203ENST00000456089 EBF2Q9HAK2 575 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.34□□□□□ -0.27
TREX1-203ENST00000456089 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 ANKRD6Q9Y2G4 727 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
TREX1-203ENST00000456089 FREM2Q5SZK8 3169 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 PLK4O00444 970 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 RNASEH2AO75792 299 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 TRIM16O95361 564 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SERPINC1P01008 464 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 MMEP08473 750 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 ATXN1LP0C7T5 689 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 PDGFRAP16234 1089 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 MZF1P28698 734 aaPredicted RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 METAP1P53582 386 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 NME3Q13232 169 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 MTA1Q13330 715 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 CST6Q15828 149 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 PTPN20Q4JDL3 420 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 CCDC157Q569K6 752 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 NCEH1Q6PIU2 408 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
TREX1-203ENST00000456089 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 STK40Q8N2I9 435 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SLC6A18Q96N87 628 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 ERGIC2Q96RQ1 377 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 PCED1AQ9H1Q7 454 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 NEUROG2Q9H2A3 272 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 FBRSQ9HAH7 460 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
TREX1-203ENST00000456089 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
TREX1-203ENST00000456089 ADAMTS20P59510 1910 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms