RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PID1Q7Z2X4 250 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 TMEM135Q86UB9 458 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 TDRD5Q8NAT2 981 aaKnown RBP18.09■□□□□ 0.49
PTPN6-204ENST00000456013 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 SLC16A10Q8TF71 515 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 ZNF669Q96BR6 464 aaPredicted RBP18.09■□□□□ 0.49
PTPN6-204ENST00000456013 SNX27Q96L92 541 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 C6orf203Q9P0P8 240 aaPredicted RBP18.09■□□□□ 0.49
PTPN6-204ENST00000456013 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
PTPN6-204ENST00000456013 PDGFRBP09619 1106 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 THRAP10827 490 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 CHN2P52757 468 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 FOLH1Q04609 750 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 Q3C1V9 767 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 OR52B2Q96RD2 323 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 TCF7L2Q9NQB0 619 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 SNTG2Q9NY99 539 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 PDCD11Q14690 1871 aaKnown RBP18.08■□□□□ 0.48
PTPN6-204ENST00000456013 ALDH1A3P47895 512 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 GRAMD1BQ3KR37 738 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 FBXL19Q6PCT2 694 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 KBTBD7Q8WVZ9 684 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 CNDP1Q96KN2 507 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 PGLYRP2Q96PD5 576 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 INPP5FQ9Y2H2 1132 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 DTNAQ9Y4J8 743 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 LTBP3Q9NS15 1303 aa18.08■□□□□ 0.48
PTPN6-204ENST00000456013 A0A0G2JLL6 359 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 ZCWPW2A0A1B0GU75 182 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 IRF9Q00978 393 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 OLIG2Q13516 323 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 LAMC2Q13753 1193 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 OTUD1Q5VV17 481 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 PRRT2Q7Z6L0 340 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 PQLC1Q8N2U9 271 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 URGCPQ8TCY9 931 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 C18orf25Q96B23 403 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 AGAP2Q99490 1192 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 SERPINI1Q99574 410 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 GATA5Q9BWX5 397 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 ILKAPQ9H0C8 392 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-204ENST00000456013 EPB41L1Q9H4G0 881 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 NMRAL1Q9HBL8 299 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 TMPRSS4Q9NRS4 437 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 BFARQ9NZS9 450 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 VANGL2Q9ULK5 521 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 CSADQ9Y600 493 aa18.07■□□□□ 0.48
PTPN6-204ENST00000456013 SMIM31A0A1B0GVY4 71 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 RGSL1A5PLK6 1076 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 TXNDC9O14530 226 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 DENRO43583 198 aaKnown RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 DAB1O75553 588 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 FBXO21O94952 628 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 AP2A1O95782 977 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 LMO2P25791 158 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 PIK3R1P27986 724 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 GNL1P36915 607 aaPredicted RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 DPYSQ14117 519 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 C9orf57Q5W0N0 161 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 C16orf89Q6UX73 402 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 BNIPLQ7Z465 357 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 NAT14Q8WUY8 206 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 FAM149B1Q96BN6 582 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 OXSMQ9NWU1 459 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 RBPJLQ9UBG7 517 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 MID2Q9UJV3 735 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 MATN2O00339 956 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 DCLK1O15075 740 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 CREB3O43889 395 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 ZNF189O75820 626 aaPredicted RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 C2P06681 752 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 GTF2A2P52657 109 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 CSE1LP55060 971 aaKnown RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 LSAMPQ13449 338 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 GJC2Q5T442 439 aaPredicted RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 MARVELD2Q8N4S9 558 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 SLC2A14Q8TDB8 520 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 NT5C3BQ969T7 300 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 AGAP3Q96P47 875 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 CAB39LQ9H9S4 337 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 CASS4Q9NQ75 786 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 NDUFA13Q9P0J0 144 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 KLHL8Q9P2G9 620 aaPredicted RBP18.06■□□□□ 0.48
PTPN6-204ENST00000456013 TSC2P49815 1807 aa18.06■□□□□ 0.48
PTPN6-204ENST00000456013 CAPN8A6NHC0 703 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 AIM2O14862 343 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 XPO1O14980 1071 aaKnown RBP18.05■□□□□ 0.48
PTPN6-204ENST00000456013 TIMM44O43615 452 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 PTPN3P26045 913 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 SERPINB5P36952 375 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 NUDT2P50583 147 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 RPS6KA3P51812 740 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 HK2P52789 917 aa18.05■□□□□ 0.48
PTPN6-204ENST00000456013 SH3BGRP55822 239 aaPredicted RBP18.05■□□□□ 0.48
PTPN6-204ENST00000456013 PITX1P78337 314 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms