RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 L3MBTL1Q9Y468 752 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 FCHO1O14526 889 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 PSMD3O43242 534 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 ERVK-10P10266 1014 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 HTR7P34969 479 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 THPOP40225 353 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 MAGEA12P43365 314 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 COG7P83436 770 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 DQX1Q8TE96 717 aaKnown RBP15.42■□□□□ 0.06
LDLR-202ENST00000455727 TRIB2Q92519 343 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 AGAP3Q96P47 875 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 TSGA13Q96PP4 275 aa15.42■□□□□ 0.06
LDLR-202ENST00000455727 CACNG3O60359 315 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 ANP32DO95626 131 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 POMCP01189 267 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 ZBTB17Q13105 803 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 HSF5Q4G112 596 aaPredicted RBP15.41■□□□□ 0.06
LDLR-202ENST00000455727 N4BP2L1Q5TBK1 243 aaPredicted RBP15.41■□□□□ 0.06
LDLR-202ENST00000455727 MBLAC2Q68D91 279 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 THEM5Q8N1Q8 247 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 DNAAF3Q8N9W5 541 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 RSPH1Q8WYR4 309 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 HAPLN3Q96S86 360 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 RBBP8Q99708 897 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 MLPHQ9BV36 600 aaPredicted RBP15.41■□□□□ 0.06
LDLR-202ENST00000455727 IL22Q9GZX6 179 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 TMLHEQ9NVH6 421 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
LDLR-202ENST00000455727 HBS1LQ9Y450 684 aaKnown RBP15.41■□□□□ 0.06
LDLR-202ENST00000455727 ZCWPW2A0A1B0GU75 182 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 SPRP35270 261 aaPredicted RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 BRCC3P46736 316 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 ANKRD20A4Q4UJ75 823 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 MIPEPQ99797 713 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 C20orf27Q9GZN8 174 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 MCM8Q9UJA3 840 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 ARHGAP42A6NI28 874 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 INPPL1O15357 1258 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 TOP3BO95985 862 aaKnown RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 FGF3P11487 239 aaPredicted RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 NFKB1P19838 968 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 TYMPP19971 482 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 TYK2P29597 1187 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 CCNG1P51959 295 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 FCGRTP55899 365 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 PRPSAP1Q14558 356 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 LPIN1Q14693 890 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 OVOS1Q6IE37 1185 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 CES3Q6UWW8 571 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 LRRTM3Q86VH5 581 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 OR10T2Q8NGX3 314 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 RNF34Q969K3 372 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 ZNF669Q96BR6 464 aaPredicted RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 CADM1Q9BY67 442 aaKnown RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 NMUR2Q9GZQ4 415 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 STN1Q9H668 368 aaKnown RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 ABCC13Q9NSE7 274 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 SNX10Q9Y5X0 201 aa15.4■□□□□ 0.06
LDLR-202ENST00000455727 FNDC1Q4ZHG4 1894 aaPredicted RBP15.4■□□□□ 0.06
LDLR-202ENST00000455727 DNAH12Q6ZR08 3092 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 C2orf71A6NGG8 1288 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 CAPN14A8MX76 684 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 GSC2O15499 205 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 USP12O75317 370 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PROCP04070 461 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 ASGR1P07306 291 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 ESRRAP11474 423 aaPredicted RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 CCNCP24863 283 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 GRK2P25098 689 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 LIMK2P53671 638 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 TSPY1Q01534 308 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 OLIG2Q13516 323 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 TBCCQ15814 346 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 FAM26DQ5JW98 314 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 TEDDM1Q5T9Z0 273 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 NAPEPLDQ6IQ20 393 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 C16orf46Q6P387 395 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 LINC00523Q86TU6 105 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PPP1R14CQ8TAE6 165 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 ADAM2Q99965 735 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 MMADHCQ9H3L0 296 aaPredicted RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 ZNF395Q9H8N7 513 aaPredicted RBP15.39■□□□□ 0.05
LDLR-202ENST00000455727 RNPEPL1Q9HAU8 725 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 SORCS3Q9UPU3 1222 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 C15orf41Q9Y2V0 281 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 SQORQ9Y6N5 450 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 IRAK2O43187 625 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 PRKCGP05129 697 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 HOXC13P31276 330 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 SERPINB8P50452 374 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 CDK7P50613 346 aa15.39■□□□□ 0.05
LDLR-202ENST00000455727 AQP5P55064 265 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms