RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ZNF512Q96ME7 567 aaPredicted RBP13.98□□□□□ -0.17
CLK3-203ENST00000454830 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 NDFIP2Q9NV92 336 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 RBM22Q9NW64 420 aaKnown RBP eCLIP13.98□□□□□ -0.179e-10■□□□□ 8.1
CLK3-203ENST00000454830 MARCH2Q9P0N8 246 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
CLK3-203ENST00000454830 MT-CYBP00156 380 aaPredicted RBP13.97□□□□□ -0.17
CLK3-203ENST00000454830 HCAR3P49019 387 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 RAP1GAP2Q684P5 730 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 RNF19BQ6ZMZ0 732 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 NPAS4Q8IUM7 802 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 RPRD1AQ96P16 312 aaPredicted RBP13.97□□□□□ -0.17
CLK3-203ENST00000454830 FSD1LQ9BXM9 530 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 SLC39A8Q9C0K1 460 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 E9PAM4 449 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 TNFRSF10BO14763 440 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 CAPN15O75808 1086 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 PGAM1P18669 254 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 BGNP21810 368 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 CHSY1Q86X52 802 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 BANPQ8N9N5 519 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 HDAC11Q96DB2 347 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 VPS11Q9H270 941 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 MANSC1Q9H8J5 431 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 FETUBQ9UGM5 382 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 A0A0G2JND7 137 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 ETFBP38117 255 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 MAGEA6P43360 314 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 GALNT2Q10471 571 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 PDK4Q16654 411 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 SPRED3Q2MJR0 410 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 FBXW10Q5XX13 1052 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 TAS1R1Q7RTX1 841 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 TMCO2Q7Z6W1 182 aaPredicted RBP13.97□□□□□ -0.17
CLK3-203ENST00000454830 FUBP3Q96I24 572 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLK3-203ENST00000454830 TTPALQ9BTX7 342 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 HS3ST4Q9Y661 456 aa13.97□□□□□ -0.17
CLK3-203ENST00000454830 TLE2Q04725 743 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 ITIH4Q14624 930 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 POU6F1Q14863 301 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 C6orf89Q6UWU4 347 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
CLK3-203ENST00000454830 DENND1AQ8TEH3 1009 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 CASD1Q96PB1 797 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 OSBPL2Q9H1P3 480 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.17
CLK3-203ENST00000454830 TLR8Q9NR97 1041 aaKnown RBP13.96□□□□□ -0.17
CLK3-203ENST00000454830 C20orf96Q9NUD7 363 aaPredicted RBP13.96□□□□□ -0.17
CLK3-203ENST00000454830 TRHDEQ9UKU6 1024 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 OR6C75A6NL08 312 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 DNM1LO00429 736 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 TOP3BO95985 862 aaKnown RBP13.96□□□□□ -0.17
CLK3-203ENST00000454830 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
CLK3-203ENST00000454830 ALDH3A1P30838 453 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 OR1D2P34982 312 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 TMPRSS15P98073 1019 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 ZBTB16Q05516 673 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 ARHGAP18Q8N392 663 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 MFSD3Q96ES6 412 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 DHRS4Q9BTZ2 278 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 MECRQ9BV79 373 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 GBA3Q9H227 469 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 SP110Q9HB58 689 aa13.96□□□□□ -0.17
CLK3-203ENST00000454830 MTMR11A4FU01 709 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 TM9SF1O15321 606 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 HOXA2O43364 376 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 UBOX5O94941 541 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 AP2A1O95782 977 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 GALTP07902 379 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 MLNP12872 115 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 TYK2P29597 1187 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 SLC25A41Q8N5S1 370 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 TEKT5Q96M29 485 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 FICDQ9BVA6 458 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 BRD8Q9H0E9 1235 aa13.96□□□□□ -0.18
CLK3-203ENST00000454830 IPO11Q9UI26 975 aaKnown RBP13.96□□□□□ -0.18
CLK3-203ENST00000454830 SCAMP3O14828 347 aaKnown RBP13.95□□□□□ -0.18
CLK3-203ENST00000454830 PRKCHP24723 683 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 DNAJB2P25686 324 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 CD68P34810 354 aaPredicted RBP13.95□□□□□ -0.18
CLK3-203ENST00000454830 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
CLK3-203ENST00000454830 MAXP61244 160 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 RASA2Q15283 850 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 NAPEPLDQ6IQ20 393 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 C16orf46Q6P387 395 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 SLC43A3Q8NBI5 491 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 NSMCE1Q8WV22 266 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 MRPL9Q9BYD2 267 aaKnown RBP13.95□□□□□ -0.18
CLK3-203ENST00000454830 CHRAC1Q9NRG0 131 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 SCML2Q9UQR0 700 aa13.95□□□□□ -0.18
CLK3-203ENST00000454830 SLC2A3P11169 496 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms