RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 APOPT1Q96IL0 206 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 CDHR1Q96JP9 859 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 BBC3Q96PG8 261 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 USP29Q9HBJ7 922 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 ANKEF1Q9NU02 776 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 ARGLU1Q9NWB6 273 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 IRAK4Q9NWZ3 460 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 ASIC5Q9NY37 505 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 AASSQ9UDR5 926 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 CNOT7Q9UIV1 285 aaKnown RBP4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 B3GNT3Q9Y2A9 372 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 MROH2BQ7Z745 1585 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 SALL3Q9BXA9 1300 aa4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 TDRD9Q8NDG6 1382 aaKnown RBP4.13□□□□□ -1.75
HMGB1P15-201ENST00000453854 DNMBPQ6XZF7 1577 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 GOLGA6L10A0A0M3HER8 536 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PABPN1LA6NDY0 278 aaKnown RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PGPEP1LA6NFU8 196 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 NPIPB13A6NJU9 1138 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 NPIPB5A8MRT5 1133 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 NPIPB4C9JG80 1138 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 NPIPB8E9PQR5 432 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 GCOM1H8Y6P7 765 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 OVOL3O00110 214 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 QSOX1O00391 747 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PEX12O00623 359 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PRYO14603 147 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PDE8BO95263 885 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 METTL18O95568 372 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 MT-CO3P00414 261 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 FAM200BP0CF97 657 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 TGFB3P10600 412 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ARSAP15289 507 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 DRD4P21917 467 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PRPH2P23942 346 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 NDUFS1P28331 727 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 AVPR2P30518 371 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 SLC8A1P32418 973 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 STAT6P42226 847 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPD2P43304 727 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 CCT8P50990 548 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 WDR5P61964 334 aaKnown RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZBED6P86452 979 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PTP4A2Q12974 167 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF169Q14929 603 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PSMD6Q15008 389 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPR68Q15743 365 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ERCC6LQ2NKX8 1250 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 LSM12Q3MHD2 195 aaKnown RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 PCID2Q5JVF3 399 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 LAIR1Q6GTX8 287 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADGRF3Q8IZF5 1079 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ACTRT2Q8TDY3 377 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 UCMAQ8WVF2 138 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 SLC9A6Q92581 669 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 SH3KBP1Q96B97 665 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF845Q96IR2 970 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 HTATIP2Q9BUP3 242 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 CLPBQ9H078 707 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 CCDC68Q9H2F9 335 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 TLR8Q9NR97 1041 aaKnown RBP4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 THAP1Q9NVV9 213 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 VPS4AQ9UN37 437 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 CNPY2Q9Y2B0 182 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
HMGB1P15-201ENST00000453854 AQRO60306 1485 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SH2D7A6NKC9 451 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 TTC34A8MYJ7 566 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 FYB1O15117 783 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SPTLC2O15270 562 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZBED4O75132 1171 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 BAG2O95816 211 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 EBLN1P0CF75 366 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 OAS2P29728 719 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 KRT20P35900 424 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CLK1P49759 484 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF84P51523 738 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 COPB1P53618 953 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SLC37A1P57057 533 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CYP4F2P78329 520 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 DMWDQ09019 674 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SEMA3AQ14563 771 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPR162Q16538 588 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 TSTQ16762 297 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CCDC30Q5VVM6 783 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF804AQ7Z570 1209 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ANKRD52Q8NB46 1076 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADPRHL1Q8NDY3 354 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZMIZ2Q8NF64 920 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 MAFAQ8NHW3 353 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 NELL1Q92832 810 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 ATP2A3Q93084 1043 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms