RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 GRIA4P48058 902 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 PITX1P78337 314 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 MYL5Q02045 173 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 CCDC15Q0P6D6 951 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 GRIK2Q13002 908 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 SUZ12Q15022 739 aaKnown RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 KRT31Q15323 416 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 C5orf22Q49AR2 442 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 C9orf64Q5T6V5 341 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 FAM46CQ5VWP2 391 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 DPY19L2P1Q6NXN4 242 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 MYEOVQ96EZ4 313 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 NAT10Q9H0A0 1025 aaKnown RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 VPS16Q9H269 839 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 ARHGEF38Q9NXL2 777 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 FARP1Q9Y4F1 1045 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 ALOX15BO15296 676 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 CCDC172P0C7W6 258 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 SLC8A1P32418 973 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 STAT1P42224 750 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 CDR2Q01850 454 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 SYCP1Q15431 976 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 TAF3Q5VWG9 929 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 XYLT1Q86Y38 959 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 APCDD1Q8J025 514 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 EPS8L1Q8TE68 723 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 FEM1AQ9BSK4 669 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 C2orf49Q9BVC5 232 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 TKTL2Q9H0I9 626 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 SIK2Q9H0K1 926 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 C6orf106Q9H6K1 298 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 VPS28Q9UK41 221 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 TBC1D30Q9Y2I9 924 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 PCDHGB2Q9Y5G2 931 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 HS3ST4Q9Y661 456 aa17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 NYNRINQ9P2P1 1898 aaKnown RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 TPRP12270 2363 aaKnown RBP17.58■□□□□ 0.4
TNFRSF4-202ENST00000453580 TTC34A8MYJ7 566 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 GIPC1O14908 333 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 RNASEH2AO75792 299 aaKnown RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 FSBPO95073 299 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 GOT1P17174 413 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 SOX5P35711 763 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 NUDT1P36639 197 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 POLR2FP61218 127 aaKnown RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 ZNF423Q2M1K9 1284 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 ARL13BQ3SXY8 428 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 C6orf118Q5T5N4 469 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 KIAA0895LQ68EN5 471 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 ADAT2Q7Z6V5 191 aaKnown RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 NOP9Q86U38 636 aaKnown RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 MMAAQ8IVH4 418 aaKnown RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 NEK11Q8NG66 645 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 OR2T34Q8NGX1 318 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 OR8D1Q8WZ84 308 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 HAPLN3Q96S86 360 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 MUC3BQ9H195 1237 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 KDM4CQ9H3R0 1056 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 RETREG1Q9H6L5 497 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 GAREM1Q9H706 876 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 FAM207AQ9NSI2 230 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 PIGVQ9NUD9 493 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 SLCO3A1Q9UIG8 710 aa17.57■□□□□ 0.4
TNFRSF4-202ENST00000453580 C1QTNF3-AMACRE9PGA6 284 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 SLC7A4O43246 635 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 GJB3O75712 270 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 IL1BP01584 269 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 CD59P13987 128 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 CTSOP43234 321 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 CCR5P51681 352 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 RACK1P63244 317 aaKnown RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 NOMO3P69849 1222 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 SIM1P81133 766 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 FOXC1Q12948 553 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 ACCSLQ4AC99 568 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 SLC45A4Q5BKX6 768 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 CCDC183Q5T5S1 534 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 CXorf57Q6NSI4 855 aaKnown RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 ZNF783Q6ZMS7 281 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 C1orf216Q8TAB5 229 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 GPT2Q8TD30 523 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 PTPRN2Q92932 1015 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 IGSF8Q969P0 613 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 RPL10LQ96L21 214 aaKnown RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 GANQ9H2C0 597 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 FSCN3Q9NQT6 498 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 LIMA1Q9UHB6 759 aaKnown RBP17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 ACACBO00763 2458 aa17.56■□□□□ 0.4
TNFRSF4-202ENST00000453580 A0A1W2PP55 124 aa17.55■□□□□ 0.4
TNFRSF4-202ENST00000453580 GOLGA8SH3BPF8 625 aa17.55■□□□□ 0.4
TNFRSF4-202ENST00000453580 MID1O15344 667 aa17.55■□□□□ 0.4
TNFRSF4-202ENST00000453580 ATP9BO43861 1147 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms