RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LRRC31Q6UY01 552 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ARHGAP36Q6ZRI8 547 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 GRASPQ7Z6J2 395 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CHSY1Q86X52 802 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CIR1Q86X95 450 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 LGI2Q8N0V4 545 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CFAP52Q8N1V2 620 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NAT8LQ8N9F0 302 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 LEMD2Q8NC56 503 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 BBOF1Q8ND07 529 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC110Q8TBZ0 833 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 DEPDC1BQ8WUY9 529 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PRCCQ92733 491 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 LRRC45Q96CN5 670 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 MRPL38Q96DV4 380 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CELF6Q96J87 481 aaKnown RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PRICKLE1Q96MT3 831 aaPredicted RBP6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PWWP2AQ96N64 755 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 FMO2Q99518 471 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 NACA2Q9H009 215 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 BRD8Q9H0E9 1235 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 EPB41L4BQ9H329 900 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 RETREG1Q9H6L5 497 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 TASP1Q9H6P5 420 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 TLE6Q9H808 572 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 TRPC7Q9HCX4 862 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 SMPD4Q9NXE4 827 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 PAK5Q9P286 719 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ANAPC5Q9UJX4 755 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CPQQ9Y646 472 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 CLUHO75153 1309 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 ATG2BQ96BY7 2078 aa6.16□□□□□ -1.42
SDC4P-201ENST00000453285 KIAA1549LQ6ZVL6 1849 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 LAMA3Q16787 3333 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 A0A0A0MRY4 1105 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RASA4BC9J798 803 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 F5H5T6 163 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 KCNK1O00180 336 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RNF103O00237 685 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 LEFTY2O00292 366 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TRDMT1O14717 391 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RASA4O43374 803 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CACNG3O60359 315 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 XYLBO75191 536 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TMEM63AO94886 807 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 GLP2RO95838 553 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 PEX11BO96011 259 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TCF3P15923 654 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CCNCP24863 283 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CD68P34810 354 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 MAPKAPK2P49137 400 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 PAPOLAP51003 745 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 YBEYP58557 167 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RPS24P62847 133 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 AP1B1Q10567 949 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZBTB17Q13105 803 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CALCOCO2Q13137 446 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 KCNJ11Q14654 390 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 MORF4L2Q15014 288 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 UBAP2Q5T6F2 1119 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 C4orf22Q6V702 233 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TMEM184AQ6ZMB5 413 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 HDXQ7Z353 690 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TFAP2DQ7Z6R9 452 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 PCGF5Q86SE9 256 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 HOOK3Q86VS8 718 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 KLHDC8BQ8IXV7 354 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 PPIL6Q8IXY8 311 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC13Q8IYE1 715 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CMTM8Q8IZV2 173 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 IQCKQ8N0W5 287 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF567Q8N184 647 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CPXM2Q8N436 756 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZCCHC9Q8N567 271 aaKnown RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TAB3Q8N5C8 712 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 C12orf76Q8N812 135 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CCNYQ8ND76 341 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 OR52K2Q8NGK3 314 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RIN3Q8TB24 985 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ITFG1Q8TB96 612 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 MAML1Q92585 1016 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 USP13Q92995 863 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 FATE1Q969F0 183 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 TIFAQ96CG3 184 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF419Q96HQ0 510 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZSWIM3Q96MP5 696 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 SPATA13Q96N96 652 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 RPRD1AQ96P16 312 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 GCNAQ96QF7 691 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CDCA3Q99618 268 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 IL12RB2Q99665 862 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 GORASP1Q9BQQ3 440 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 FOXP3Q9BZS1 431 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 SMG9Q9H0W8 520 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms