RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CENPCQ03188 943 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 HNRNPDQ14103 355 aaKnown RBP13.28□□□□□ -0.28
CHD3-206ENST00000452447 TEAD4Q15561 434 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 BRMS1LQ5PSV4 323 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 GPT2Q8TD30 523 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 IGSF8Q969P0 613 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 BIRC7Q96CA5 298 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 NPY6RQ99463 290 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 PIGVQ9NUD9 493 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 SLC25A13Q9UJS0 675 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
CHD3-206ENST00000452447 ITIH6Q6UXX5 1313 aa13.27□□□□□ -0.28
CHD3-206ENST00000452447 USP24Q9UPU5 2620 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 IGF2RP11717 2491 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 SPAARA0A1B0GVQ0 90 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 A0A1W2PP55 124 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 FAM170AA1A519 330 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 CLDN11O75508 207 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 GJB3O75712 270 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 MMEP08473 750 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 SLC8A1P32418 973 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 SCNN1AP37088 669 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 GGCXP38435 758 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 CSNK1EP49674 416 aaKnown RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 ELAVL3Q14576 367 aaKnown RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 KRT31Q15323 416 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 ST3GAL2Q16842 350 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 SLC25A52Q3SY17 297 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 ACCSLQ4AC99 568 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 CDKAL1Q5VV42 579 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 CXorf57Q6NSI4 855 aaKnown RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 LRRC31Q6UY01 552 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 ZNF677Q86XU0 584 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 XYLT1Q86Y38 959 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 EPS8L1Q8TE68 723 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 PTPRN2Q92932 1015 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 FEM1AQ9BSK4 669 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 NEUROG2Q9H2A3 272 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 GAREM1Q9H706 876 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 FAM207AQ9NSI2 230 aaPredicted RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 ANO10Q9NW15 660 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 FANCLQ9NW38 375 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 VPS28Q9UK41 221 aa13.27□□□□□ -0.29
CHD3-206ENST00000452447 NYNRINQ9P2P1 1898 aaKnown RBP13.27□□□□□ -0.29
CHD3-206ENST00000452447 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 GOLGA4Q13439 2230 aaKnown RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 TMEM131Q92545 1883 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 LRRC72A6NJI9 287 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 GOLGA8SH3BPF8 625 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 SH3BP5O60239 455 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 GFPT2O94808 682 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 ADCY5O95622 1261 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 ADH1BP00325 375 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 IL1BP01584 269 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 ZNF18P17022 549 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 C5AR1P21730 350 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 CD27P26842 260 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 PSMD8P48556 350 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 CXCR3P49682 368 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 GALCP54803 685 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 CDH4P55283 916 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 HLA-BQ31612 363 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 C2CD6Q53TS8 623 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 KIAA0895LQ68EN5 471 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 RBM43Q6ZSC3 357 aaKnown RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 ADAT2Q7Z6V5 191 aaKnown RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 NAXDQ8IW45 347 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 STK40Q8N2I9 435 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 CPA5Q8WXQ8 436 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
CHD3-206ENST00000452447 SPAG5Q96R06 1193 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 FAM129BQ96TA1 746 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 OSGEPQ9NPF4 335 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 ARHGEF38Q9NXL2 777 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 FZD4Q9ULV1 537 aa13.26□□□□□ -0.29
CHD3-206ENST00000452447 KNTC1P50748 2209 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 KMT2BQ9UMN6 2715 aaPredicted RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TFE3P19532 575 aaPredicted RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 KLK7P49862 253 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 IRAK1P51617 712 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 TRIP6Q15654 476 aaKnown RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
CHD3-206ENST00000452447 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 NCEH1Q6PIU2 408 aa13.25□□□□□ -0.29
CHD3-206ENST00000452447 DSG4Q86SJ6 1040 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms