RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
SCN9A-204ENST00000452182 HEBP1Q9NRV9 189 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 DEC1Q9P2X7 70 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 CLEC4EQ9ULY5 219 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 PIAS3Q9Y6X2 628 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 MIA3Q5JRA6 1907 aa11.9□□□□□ -0.5
SCN9A-204ENST00000452182 A0A0A0MRY4 1105 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ILVBLA1L0T0 632 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 CISD3P0C7P0 127 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PYGMP11217 842 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 AMPD1P23109 780 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 DGKGP49619 791 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PLK1P53350 603 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PRKCQQ04759 706 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 TFAP2DQ7Z6R9 452 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PHTF2Q8N3S3 785 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 CARNMT1Q8N4J0 409 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 NAT16Q8N8M0 369 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 WFDC5Q8TCV5 224 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 WDR24Q96S15 920 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MAK16Q9BXY0 300 aaKnown RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MUTYHQ9UIF7 546 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MAN2B1O00754 1011 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ENC1O14682 589 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PRLRP16471 622 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 HLA-FP30511 346 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 SERPINB6P35237 376 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ETFBP38117 255 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 SOX9P48436 509 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 NDST2P52849 883 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 YBEYP58557 167 aaPredicted RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 TFDP2Q14188 446 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 DMC1Q14565 340 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PAFAH1B3Q15102 231 aaKnown RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MLF2Q15773 248 aaPredicted RBP11.89□□□□□ -0.51
SCN9A-204ENST00000452182 FSCBQ5H9T9 825 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 TMCO3Q6UWJ1 677 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 PNKPQ96T60 521 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 OSBPL8Q9BZF1 889 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 MAGEH1Q9H213 219 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 NDFIP2Q9NV92 336 aa11.89□□□□□ -0.51
SCN9A-204ENST00000452182 TRIOO75962 3097 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 CXorf51AA0A1B0GTR3 108 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 SHISA7A6NL88 538 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
SCN9A-204ENST00000452182 CES2O00748 559 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 KCNK3O14649 394 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 RAMP2O60895 175 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 RHOCP08134 193 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 SLC6A11P48066 632 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 GALK1P51570 392 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 STARD6P59095 220 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 ZXDAP98168 799 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 GNA12Q03113 381 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 LMAN2Q12907 356 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 PARP15Q460N3 678 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 PAPD7Q5XG87 772 aaKnown RBP11.88□□□□□ -0.51
SCN9A-204ENST00000452182 NCBP2-AS2Q69YL0 99 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 TXNDC11Q6PKC3 985 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 AHI1Q8N157 1196 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 PLD5Q8N7P1 536 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 TERB1Q8NA31 727 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 OR52K2Q8NGK3 314 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
SCN9A-204ENST00000452182 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 ALG14Q96F25 216 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 SHDQ96IW2 340 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 PBKQ96KB5 322 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 NAPGQ99747 312 aaPredicted RBP11.88□□□□□ -0.51
SCN9A-204ENST00000452182 FEM1AQ9BSK4 669 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 NOL6Q9H6R4 1146 aaKnown RBP11.88□□□□□ -0.51
SCN9A-204ENST00000452182 LRRC19Q9H756 370 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 ARHGEF3Q9NR81 526 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 ETNK2Q9NVF9 386 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 OR51B4Q9Y5P0 310 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 RAD54BQ9Y620 910 aa11.88□□□□□ -0.51
SCN9A-204ENST00000452182 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms