RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 KCNT1Q5JUK3 1230 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 SND1Q7KZF4 910 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP1-204ENST00000452143 RRAGAQ7L523 313 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 TMPRSS12Q86WS5 348 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
USP1-204ENST00000452143 ARHGEF19Q8IW93 802 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 TRIM59Q8IWR1 403 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 CFAP52Q8N1V2 620 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 OXR1Q8N573 874 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 AADATQ8N5Z0 425 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 ERCC4Q92889 916 aaPredicted RBP11.25□□□□□ -0.61
USP1-204ENST00000452143 FAM131CQ96AQ9 280 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 SPAG5Q96R06 1193 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MED15Q96RN5 788 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 NEUROG2Q9H2A3 272 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 GDF3Q9NR23 364 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 ARID1BQ8NFD5 2236 aaPredicted RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 A0A087WV48 116 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 A0A1B0GVM2 712 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TRABD2BA6NFA1 517 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TCAF2A6NFQ2 919 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TTC34A8MYJ7 566 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 E5RJQ4 531 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 F5H5T6 163 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 KCNK3O14649 394 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SLC7A4O43246 635 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 LATO43561 262 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 C1SP09871 688 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SLC2A3P11169 496 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 GOT1P17174 413 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 ABCB4P21439 1286 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TACR2P21452 398 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 NUDT1P36639 197 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 CTSOP43234 321 aaPredicted RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 YWHAZP63104 245 aaKnown RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 NUCB2P80303 420 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 IL9RQ01113 521 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 KCNJ12Q14500 433 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SYPL2Q5VXT5 272 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 RAP1GAP2Q684P5 730 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 C19orf48Q6RUI8 117 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 MMS22LQ6ZRQ5 1243 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 DSG4Q86SJ6 1040 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 TMEM110Q86TL2 294 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 LGI2Q8N0V4 545 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 ATP6V0D2Q8N8Y2 350 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 EHBP1Q8NDI1 1231 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SAP25Q8TEE9 199 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 PTPRN2Q92932 1015 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 NXPE2Q96DL1 559 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 FAM129BQ96TA1 746 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 ERVMER34-1Q9H9K5 563 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 EBF2Q9HAK2 575 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 AASDHPPTQ9NRN7 309 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP1-204ENST00000452143 SLC12A6Q9UHW9 1150 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
USP1-204ENST00000452143 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
USP1-204ENST00000452143 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP1-204ENST00000452143 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 A0A1W2PR77 199 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 KCNU1A8MYU2 1149 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 ENC1O14682 589 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 MAGEC1O60732 1142 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 RFPL3O75679 317 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 CALCAP01258 141 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 IL1BP01584 269 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
USP1-204ENST00000452143 WNT1P04628 370 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 ITGAVP06756 1048 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 GLI1P08151 1106 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 KRT5P13647 590 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 GNA15P30679 374 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 DRD3P35462 400 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 PLK1P53350 603 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 NXPH1P58417 271 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 CYP4F3Q08477 520 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 OVGP1Q12889 678 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 PDCLQ13371 301 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
USP1-204ENST00000452143 GSE1Q14687 1217 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 ZC3H12AQ5D1E8 599 aaKnown RBP11.23□□□□□ -0.61
USP1-204ENST00000452143 NAPEPLDQ6IQ20 393 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 KLHL10Q6JEL2 608 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 DHRS13Q6UX07 377 aa11.23□□□□□ -0.61
USP1-204ENST00000452143 IQCHQ86VS3 1027 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms