RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
CTNS-204ENST00000452111 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
CTNS-204ENST00000452111 SLC6A14Q9UN76 642 aa18.47■□□□□ 0.55
CTNS-204ENST00000452111 EDDM13A0A1B0GTR0 161 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 SYCE3A1L190 88 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 TM4SF5O14894 197 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 CLDN11O75508 207 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 SERPINF2P08697 491 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ACSL1P33121 698 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 CDH4P55283 916 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ZBTB16Q05516 673 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 GFPT1Q06210 699 aaPredicted RBP18.46■□□□□ 0.55
CTNS-204ENST00000452111 SULT2A1Q06520 285 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 PTP4A2Q12974 167 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 UAP1L1Q3KQV9 507 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 TTC31Q49AM3 519 aaPredicted RBP18.46■□□□□ 0.55
CTNS-204ENST00000452111 FILIP1LQ4L180 1135 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ALFQ53S48 1182 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 C9orf64Q5T6V5 341 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 DCAF12L1Q5VU92 463 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 DAB2IPQ5VWQ8 1189 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ARCQ7LC44 396 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 BNIPLQ7Z465 357 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 RABEPKQ7Z6M1 372 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 CADM4Q8NFZ8 388 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 JOSD2Q8TAC2 188 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 GANCQ8TET4 914 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 RXFP2Q8WXD0 754 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 AGPAT1Q99943 283 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 GTPBP2Q9BX10 602 aaKnown RBP18.46■□□□□ 0.55
CTNS-204ENST00000452111 MIR1-1HGQ9H1L0 117 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 CAPN10Q9HC96 672 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 VPS28Q9UK41 221 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 ITIH6Q6UXX5 1313 aa18.46■□□□□ 0.55
CTNS-204ENST00000452111 RNASEH1O60930 286 aaKnown RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 GNSP15586 552 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 FERP16591 822 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 SDC4P31431 198 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 NNMTP40261 264 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 PLK1P53350 603 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 ATXN3P54252 364 aaPredicted RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 ARID5BQ14865 1188 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 C15orf59Q2T9L4 293 aaPredicted RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 C5orf22Q49AR2 442 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 RAB6CQ53S08 254 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 LRRC31Q6UY01 552 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 TFAP2DQ7Z6R9 452 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 MMAAQ8IVH4 418 aaKnown RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 ZNF683Q8IZ20 524 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 ZCCHC9Q8N567 271 aaKnown RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 SNX19Q92543 992 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 ALG14Q96F25 216 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 FEM1AQ9BSK4 669 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 BTBD1Q9H0C5 482 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 RAB6CQ9H0N0 254 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 MUC3BQ9H195 1237 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 PABPC3Q9H361 631 aaKnown RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 C6orf106Q9H6K1 298 aaPredicted RBP18.45■□□□□ 0.54
CTNS-204ENST00000452111 TMEM51Q9NW97 253 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 MPP6Q9NZW5 540 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 SUSD2Q9UGT4 822 aa18.45■□□□□ 0.54
CTNS-204ENST00000452111 TNRC6BQ9UPQ9 1833 aaKnown RBP18.44■□□□□ 0.54
CTNS-204ENST00000452111 TARSL2A2RTX5 802 aaKnown RBP18.44■□□□□ 0.54
CTNS-204ENST00000452111 METTL12A8MUP2 240 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 E9PAM4 449 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 MID1O15344 667 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 CALB1P05937 261 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 RHOCP08134 193 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 C7P10643 843 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 VAV1P15498 845 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 PSMD8P48556 350 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 IQCB1Q15051 598 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 CST6Q15828 149 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 CCDC14Q49A88 953 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 PHF13Q86YI8 300 aaPredicted RBP18.44■□□□□ 0.54
CTNS-204ENST00000452111 STK40Q8N2I9 435 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 DNASE2BQ8WZ79 361 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 PTPRN2Q92932 1015 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 C1orf74Q96LT6 269 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 PPP1R9BQ96SB3 815 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 SELENOOQ9BVL4 669 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 SLC25A13Q9UJS0 675 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 TBC1D30Q9Y2I9 924 aa18.44■□□□□ 0.54
CTNS-204ENST00000452111 A0A1W2PP55 124 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 C2CD4BA6NLJ0 364 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 DRGXA6NNA5 263 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 SEMA4FO95754 770 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 CCDC172P0C7W6 258 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 KRT3P12035 628 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 ACCSLQ4AC99 568 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 LRSAM1Q6UWE0 723 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 MON1BQ7L1V2 547 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 OR2I1PQ8NGU4 316 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 BAP1Q92560 729 aa18.43■□□□□ 0.54
CTNS-204ENST00000452111 NAP1L5Q96NT1 182 aaPredicted RBP18.43■□□□□ 0.54
CTNS-204ENST00000452111 HAPLN3Q96S86 360 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms