RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 BIRC7Q96CA5 298 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 TBCBQ99426 244 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 ANGPTL2Q9UKU9 493 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 VANGL2Q9ULK5 521 aa12.74□□□□□ -0.37
MSH5-209ENST00000450148 MAP1BP46821 2468 aaKnown RBP12.74□□□□□ -0.37
MSH5-209ENST00000450148 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 MID1O15344 667 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 TOP3BO95985 862 aaKnown RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 IGHV4-34P06331 123 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 VAV1P15498 845 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 SULT1E1P49888 294 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 COPB1P53618 953 aaKnown RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 RNASE9P60153 205 aaKnown RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 FMO1Q01740 532 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 MTA1Q13330 715 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 NCAPHQ15003 741 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 CST6Q15828 149 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 ALFQ53S48 1182 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 BRMS1LQ5PSV4 323 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 RABGAP1LQ5R372 815 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 ERICH1Q86X53 443 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 CCDC117Q8IWD4 279 aaPredicted RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 CPA5Q8WXQ8 436 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 RNF34Q969K3 372 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 RPRD1AQ96P16 312 aaPredicted RBP12.73□□□□□ -0.37
MSH5-209ENST00000450148 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 ZDHHC5Q9C0B5 715 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 TKTL2Q9H0I9 626 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 MIR1-1HGQ9H1L0 117 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 SYNCQ9H7C4 482 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 OSGEPQ9NPF4 335 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 ADAMTS1Q9UHI8 967 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 STAP1Q9ULZ2 295 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 SCML1Q9UN30 329 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 SNX10Q9Y5X0 201 aa12.73□□□□□ -0.37
MSH5-209ENST00000450148 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 A0A1W2PP55 124 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 DRGXA6NNA5 263 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 CNTN5O94779 1100 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 GFPT2O94808 682 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 ZNF18P17022 549 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 SOX5P35711 763 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 GALCP54803 685 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 CDH4P55283 916 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 SULT2A1Q06520 285 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 SLC14A1Q13336 389 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 SLC25A52Q3SY17 297 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 FAM102AQ5T9C2 384 aaPredicted RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 ARCQ7LC44 396 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 ZNF677Q86XU0 584 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 AADATQ8N5Z0 425 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 FAM131CQ96AQ9 280 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 PSMB7Q99436 277 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 SIK2Q9H0K1 926 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 NEUROG2Q9H2A3 272 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 EBF2Q9HAK2 575 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 FBXL12Q9NXK8 326 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 ZNF212Q9UDV6 495 aa12.72□□□□□ -0.37
MSH5-209ENST00000450148 LIMA1Q9UHB6 759 aaKnown RBP12.72□□□□□ -0.37
MSH5-209ENST00000450148 PTPRBP23467 1997 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 PLXNB3Q9ULL4 1909 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 ATP9BO43861 1147 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 SH3BP5O60239 455 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CLDN11O75508 207 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 ENDOD1O94919 500 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 F9P00740 461 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 ZNF883P0CG24 379 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
MSH5-209ENST00000450148 MMP8P22894 467 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CD27P26842 260 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 SLC8A1P32418 973 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 DRD3P35462 400 aa12.71□□□□□ -0.37
MSH5-209ENST00000450148 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms