RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 STK40Q8N2I9 435 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 C12orf29Q8N999 325 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 KDM1BQ8NB78 822 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 TMEM145Q8NBT3 493 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 SSC4DQ8WTU2 575 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 PLD4Q96BZ4 506 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 PNPLA8Q9NP80 782 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 DNAJC28Q9NX36 388 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 SALL4Q9UJQ4 1053 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 UBE4BO95155 1302 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 SLC31A1O15431 190 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 SLC7A4O43246 635 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 PLRG1O43660 514 aaKnown RBP13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 PHACTR2O75167 634 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CLSTN1O94985 981 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 DRD3P35462 400 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CSKP41240 450 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CASP5P51878 434 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 PDX1P52945 283 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 PERM1Q5SV97 790 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 ADGRF1Q5T601 910 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 MYOCQ99972 504 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 STRADBQ9C0K7 418 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 ERVW-1Q9UQF0 538 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 CSNK1G3Q9Y6M4 447 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 LRBAP50851 2863 aa13.04□□□□□ -0.32
AC004540.1-204ENST00000449537 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 MUSKO15146 869 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 MTSS1O43312 755 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 SRPRAP08240 638 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 JMJD7P0C870 316 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 RPIAP49247 311 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 MPP7Q5T2T1 576 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 ZFAND4Q86XD8 727 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF557Q8N988 423 aaPredicted RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 OR13H1Q8NG92 308 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 C9orf43Q8TAL5 461 aaPredicted RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 NAT6Q93015 286 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 SLC12A9Q9BXP2 914 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 SDCBP2Q9H190 292 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 PISDQ9UG56 409 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 STOML2Q9UJZ1 356 aa13.03□□□□□ -0.32
AC004540.1-204ENST00000449537 A1L4Q6 167 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 CASC3O15234 703 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 TBL1XO60907 577 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 KIF20AO95235 890 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 HGFP14210 728 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 SGSHP51688 502 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 NDST1P52848 882 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 SCARA5Q6ZMJ2 495 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 DCP2Q8IU60 420 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 FIBINQ8TAL6 211 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 GLMNQ92990 594 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 FAM131CQ96AQ9 280 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 CYFIP2Q96F07 1278 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 IL12RB2Q99665 862 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
AC004540.1-204ENST00000449537 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 NTN3O00634 580 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 TPP1O14773 563 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 STX6O43752 255 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 PRLRP16471 622 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 PDCP20941 246 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 COL8A1P27658 744 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 AKT2P31751 481 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 DCTP40126 519 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 PSMD6Q15008 389 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms