RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 RABGGTBP53611 331 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 LIMK2P53671 638 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 SMAD1Q15797 465 aaKnown RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 MUM1Q2TAK8 710 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 CCDC153Q494R4 210 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 ANO7Q6IWH7 933 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 HDAC11Q96DB2 347 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 AGAP3Q96P47 875 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 SYT15Q9BQS2 421 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 GBA3Q9H227 469 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 FAM96AQ9H5X1 160 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 DNAJC28Q9NX36 388 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 BFARQ9NZS9 450 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 FLRT1Q9NZU1 646 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 C17orf102A2RUQ5 167 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 ZNF195O14628 629 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 MTSS1O43312 755 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 MX2P20592 715 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 SPRP35270 261 aaPredicted RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 CPOXP36551 454 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 SERPINB8P50452 374 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 GALNT2Q10471 571 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 TRMT5Q32P41 509 aaKnown RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 ANKRD20A4Q4UJ75 823 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 LRRC74BQ6ZQY2 392 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 GSTCDQ8NEC7 633 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 KCNK16Q96T55 309 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
TOM1-210ENST00000449058 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 ZNF212Q9UDV6 495 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 TRHDEQ9UKU6 1024 aa17.32■□□□□ 0.36
TOM1-210ENST00000449058 SHROOM3Q8TF72 1996 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 KLHL2O95198 593 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 LTFP02788 710 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 MYL3P08590 195 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 RALBP11234 206 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CPA3P15088 417 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 GMPRP36959 345 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 LHX1P48742 406 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 IDH3AP50213 366 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CPT1AP50416 773 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CDK7P50613 346 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CACNA2D1P54289 1103 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 ABCE1P61221 599 aaKnown RBP17.31■□□□□ 0.36
TOM1-210ENST00000449058 BHLHA9Q7RTU4 235 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 STRA8Q7Z7C7 330 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CMC1Q7Z7K0 106 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 PPP4R1Q8TF05 950 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 PNPOQ9NVS9 261 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 ZNF358Q9NW07 568 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 DONSONQ9NYP3 566 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 RRN3Q9NYV6 651 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 CORO1CQ9ULV4 474 aaPredicted RBP17.31■□□□□ 0.36
TOM1-210ENST00000449058 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
TOM1-210ENST00000449058 MYBPHLA2RUH7 354 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 A6NHS1 94 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 MEIS3P2A8K0S8 358 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 HHLA1C9JL84 531 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 MYL4P12829 197 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 NCAM1P13591 858 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 MAP2K5Q13163 448 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 FSTL4Q6MZW2 842 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 THTPAQ9BU02 230 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 COLEC11Q9BWP8 271 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 SLC38A7Q9NVC3 462 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 DDIT4Q9NX09 232 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 SLC7A8Q9UHI5 535 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
TOM1-210ENST00000449058 KIF1CO43896 1103 aaKnown RBP17.3■□□□□ 0.36
TOM1-210ENST00000449058 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
TOM1-210ENST00000449058 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 ZNF135P52742 658 aaPredicted RBP17.3■□□□□ 0.36
TOM1-210ENST00000449058 ACTR3P61158 418 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 BEX3Q00994 111 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 ARL13BQ3SXY8 428 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 RIPOR1Q6ZS17 1223 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 CLEC14AQ86T13 490 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 LMNTD2Q8IXW0 634 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 DTX3LQ8TDB6 740 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 SCG3Q8WXD2 468 aaKnown RBP17.3■□□□□ 0.36
TOM1-210ENST00000449058 DPF3Q92784 378 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 CLPTM1LQ96KA5 538 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 PANX3Q96QZ0 392 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 AGAP2Q99490 1192 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 MCMBPQ9BTE3 642 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 SOX13Q9UN79 622 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 NUP205Q92621 2012 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 SIN3BO75182 1162 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 CIB2O75838 187 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 F9P00740 461 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 MPOP05164 745 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 NPY2RP49146 381 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 CXCR3P49682 368 aa17.3■□□□□ 0.36
TOM1-210ENST00000449058 SPRYD7Q5W111 196 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms