RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 STAMBPL1Q96FJ0 436 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SMC6Q96SB8 1091 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 CLSTN3Q9BQT9 956 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 NKIRAS1Q9NYS0 192 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 MPP6Q9NZW5 540 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 NUP205Q92621 2012 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 CXorf49A8MYA2 514 aaPredicted RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 SOD2P04179 222 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 DEFB103AP81534 67 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SPARCL1Q14515 664 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 QPCTQ16769 361 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 KIAA1841Q6NSI8 718 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 CYS1Q717R9 158 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SLC39A11Q8N1S5 342 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 ATPAF2Q8N5M1 289 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 CNTD1Q8N815 330 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 DENND1AQ8TEH3 1009 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 ARNTL2Q8WYA1 636 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SGSM3Q96HU1 749 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 BTN2A3PQ96KV6 586 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 MLPHQ9BV36 600 aaPredicted RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 UBE2OQ9C0C9 1292 aaKnown RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 CCSER2Q9H7U1 834 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 MLXIPLQ9NP71 852 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SSU72Q9NP77 194 aaKnown RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 SMYD2Q9NRG4 433 aa18.13■□□□□ 0.49
LMNA-208ENST00000448611 SMG5Q9UPR3 1016 aaKnown RBP18.13■□□□□ 0.49
LMNA-208ENST00000448611 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 ERI2A8K979 691 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 C2CD2LO14523 706 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 TYROBPO43914 113 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 MAFKO60675 156 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 SPAG7O75391 227 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 NFKB1P19838 968 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 MGAT1P26572 445 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 TUFMP49411 452 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 SESN2P58004 480 aaPredicted RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 TRMT10BQ6PF06 316 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 SLC26A11Q86WA9 606 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 LRRC6Q86X45 466 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 ATP6V0D2Q8N8Y2 350 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 DYDC1Q8WWB3 177 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 PIH1D1Q9NWS0 290 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 FNIP2Q9P278 1114 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 PPARGC1AQ9UBK2 798 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 VANGL2Q9ULK5 521 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 MAGED2Q9UNF1 606 aaPredicted RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 MRPL42Q9Y6G3 142 aaKnown RBP18.12■□□□□ 0.49
LMNA-208ENST00000448611 IKBKGQ9Y6K9 419 aa18.12■□□□□ 0.49
LMNA-208ENST00000448611 IGLV3-10A0A075B6K4 115 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ARHGAP42A6NI28 874 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 FAM159BA6NKW6 160 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CACNG3O60359 315 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 TIMP1P01033 207 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 INHBAP08476 426 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CSF2RAP15509 400 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 KRT4P19013 534 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CRADDP78560 199 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 DSG1Q02413 1049 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 SPOUT1Q5T280 376 aaKnown RBP18.11■□□□□ 0.49
LMNA-208ENST00000448611 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CCNJLQ8IV13 435 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 KLHDC8BQ8IXV7 354 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CKAP2Q8WWK9 683 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZNF558Q96NG5 402 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 MOCS1Q9NZB8 636 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZNF180Q9UJW8 692 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 IQANK1A0A1B0GTG1 560 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 EBAG9O00559 213 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 TLR5O60602 858 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ALDH1A2O94788 518 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ABLIM3O94929 683 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 SEC24AO95486 1093 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CCNB1P14635 433 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 RHOQP17081 205 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 WDR4P57081 412 aaKnown RBP18.11■□□□□ 0.49
LMNA-208ENST00000448611 RING1Q06587 406 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 OLIG2Q13516 323 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 FAM117BQ6P1L5 589 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 CTAGE3PQ8IX95 158 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZNF276Q8N554 614 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 PPM1NQ8N819 430 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZNF461Q8TAF7 563 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZNF419Q96HQ0 510 aaPredicted RBP18.11■□□□□ 0.49
LMNA-208ENST00000448611 IL12RB2Q99665 862 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 ZYG11BQ9C0D3 744 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 NOL6Q9H6R4 1146 aaKnown RBP18.11■□□□□ 0.49
LMNA-208ENST00000448611 CASS4Q9NQ75 786 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 SYBUQ9NX95 663 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 HSFX1Q9UBD0 423 aa18.11■□□□□ 0.49
LMNA-208ENST00000448611 SHROOM3Q8TF72 1996 aa18.1■□□□□ 0.49
LMNA-208ENST00000448611 MATN3O15232 486 aa18.1■□□□□ 0.49
LMNA-208ENST00000448611 HMBSP08397 361 aa18.1■□□□□ 0.49
LMNA-208ENST00000448611 PGAM1P18669 254 aa18.1■□□□□ 0.49
LMNA-208ENST00000448611 WDR5P61964 334 aaKnown RBP18.1■□□□□ 0.49
LMNA-208ENST00000448611 SNX30Q5VWJ9 437 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms