RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 RRM1P23921 792 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 PRKCHP24723 683 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 GSCP56915 257 aaPredicted RBP25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 ZBED6P86452 979 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 FNDC3BQ53EP0 1204 aaKnown RBP25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 TRIM61Q5EBN2 209 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 SERPINA13PQ6UXR4 307 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 BNIPLQ7Z465 357 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 SLC6A17Q9H1V8 727 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 KIAA1522Q9P206 1035 aaPredicted RBP25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 INTS6Q9UL03 887 aaKnown RBP25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 WASF3Q9UPY6 502 aa25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 LUC7L2Q9Y383 392 aaKnown RBP25.81■■□□□ 1.72
HTATSF1-203ENST00000448450 ATRXP46100 2492 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 DDX3XO00571 662 aaKnown RBP eCLIP25.8■■□□□ 1.728e-9■■■■■ 65.4
HTATSF1-203ENST00000448450 CBFA2T2O43439 604 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 ENDOD1O94919 500 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 ATP5BP06576 529 aaKnown RBP25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 SPINK2P20155 84 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 GPD1P21695 349 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 CSKP41240 450 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 PI4KAP42356 2102 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 BYSLQ13895 437 aaKnown RBP25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 STARD3Q14849 445 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 E2F5Q15329 346 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 TDRD12Q587J7 1177 aaKnown RBP25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 ARMCX6Q7L4S7 300 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 KDF1Q8NAX2 398 aaPredicted RBP25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 WDFY3Q8IZQ1 3526 aa25.8■■□□□ 1.72
HTATSF1-203ENST00000448450 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 TCRBV5S1A1TA0A578 114 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 TMEM8BA6NDV4 472 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 SYNCRIPO60506 623 aaKnown RBP25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 FTLP02792 175 aaPredicted RBP25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 GYPCP04921 128 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 EPHX1P07099 455 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 DPP6P42658 865 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 PTPN9P43378 593 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 RPL7AP62424 266 aaKnown RBP25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 ENPP2Q13822 863 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 PTPRNQ16849 979 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 PITRM1Q5JRX3 1037 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 TTC39BQ5VTQ0 682 aaPredicted RBP25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 SYT12Q8IV01 421 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 TMEFF1Q8IYR6 380 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 APCDD1Q8J025 514 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 FRMD1Q8N878 549 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 ZNF366Q8N895 744 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 DEFB124Q8NES8 71 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 FAM172AQ8WUF8 416 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 MCEEQ96PE7 176 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 CD248Q9HCU0 757 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 TMEM51Q9NW97 253 aa25.79■■□□□ 1.72
HTATSF1-203ENST00000448450 GON4LQ3T8J9 2241 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 A0A1B0GVM2 712 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 TCAF2A6NFQ2 919 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 ATMINO43313 823 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 SRGAP2O75044 1071 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 DLDP09622 509 aaKnown RBP25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 NDUFV2P19404 249 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 CASP14P31944 242 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 MAPK8P45983 427 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 SPDYCQ5MJ68 293 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 HGSNATQ68CP4 663 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 PPP1R2P3Q6NXS1 205 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 DCUN1D2Q6PH85 259 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 SYN2Q92777 582 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 TTC17Q96AE7 1141 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 IQCDQ96DY2 449 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 VCPIP1Q96JH7 1222 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 SCNM1Q9BWG6 230 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 SLC32A1Q9H598 525 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.78■■□□□ 1.722e-9■■■■□ 26.4
HTATSF1-203ENST00000448450 PKD1L2Q7Z442 2459 aa25.78■■□□□ 1.72
HTATSF1-203ENST00000448450 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 ANKRD62A6NC57 917 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 CNTN5O94779 1100 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 MOCS3O95396 460 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 PLEKP08567 350 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 GZMAP12544 262 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 MZF1P28698 734 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 PTGER3P43115 390 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 CTSOP43234 321 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 ZNF177Q13360 481 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 LYSMD4Q5XG99 296 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 LRRC31Q6UY01 552 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 CENPIQ92674 756 aaPredicted RBP25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 C1orf74Q96LT6 269 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 HAPLN3Q96S86 360 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 ITIH6Q6UXX5 1313 aa25.77■■□□□ 1.72
HTATSF1-203ENST00000448450 DSPP15924 2871 aaKnown RBP25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 RTN2O75298 545 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 TOP3BO95985 862 aaKnown RBP25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 SERPING1P05155 500 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 ENGP17813 658 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 ADRA1BP35368 520 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 PLEKHG6Q3KR16 790 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 C5orf22Q49AR2 442 aa25.76■■□□□ 1.71
HTATSF1-203ENST00000448450 ALFQ53S48 1182 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms