RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ARHGAP15Q53QZ3 475 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CBWD3Q5JTY5 395 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CBWD5Q5RIA9 395 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZPBP2Q6X784 338 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TRIM48Q8IWZ4 208 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 WDR48Q8TAF3 677 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MRPS31Q92665 395 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 FDXACB1Q9BRP7 624 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TRPM5Q9NZQ8 1165 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RPS6KB2Q9UBS0 482 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CDH9Q9ULB4 789 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SPATA31D1Q6ZQQ2 1576 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 DCCP43146 1447 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 F8VP50 259 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 VTNP04004 478 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MYBL2P10244 700 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MBL2P11226 248 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 LBPP18428 481 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 KDELR1P24390 212 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 S100A3P33764 101 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 KPNA1P52294 538 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 NAGLUP54802 743 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 EIF2B5Q13144 721 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 DGCR6Q14129 220 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ISLR2Q6UXK2 745 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TTC7BQ86TV6 843 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CDH24Q86UP0 819 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ANKRD13AQ8IZ07 590 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CARNMT1Q8N4J0 409 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZNF276Q8N554 614 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 LPCAT1Q8NF37 534 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 OR7A2PQ8NGA2 310 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CPB2Q96IY4 423 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SYT15Q9BQS2 421 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CDHR5Q9HBB8 845 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 XPNPEP3Q9NQH7 507 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CLIC5Q9NZA1 410 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ARHGAP28Q9P2N2 729 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CORO1CQ9ULV4 474 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SF3B1O75533 1304 aaKnown RBP eCLIP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CNTNAP4Q9C0A0 1308 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TAF4O00268 1085 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 MICAL2O94851 1124 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PGM3O95394 542 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 LRG1P02750 347 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CKMP06732 381 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ABCB1P08183 1280 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ALDH7A1P49419 539 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ATP12AP54707 1039 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SOX10P56693 466 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ADIGQ0VDE8 80 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 BST1Q10588 318 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GRIK3Q13003 919 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PARP6Q2NL67 630 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 INO80DQ53TQ3 878 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 LRRC38Q5VT99 294 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CDC73Q6P1J9 531 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 METTL7BQ6UX53 244 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ARCQ7LC44 396 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 OTOP1Q7RTM1 612 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 AMER2Q8N7J2 671 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 MAGEE2Q8TD90 523 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TMEM169Q96HH4 297 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TPD52L3Q96J77 140 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TSEN34Q9BSV6 310 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 MTIF3Q9H2K0 278 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 EPB41L4BQ9H329 900 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 REEP1Q9H902 201 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PRDM16Q9HAZ2 1276 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ETNK2Q9NVF9 386 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 A0A087X1B8 175 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 BTNL10A8MVZ5 291 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TPP1O14773 563 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 OPLAHO14841 1288 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 TNFRSF21O75509 655 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 STX11O75558 287 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 HMGCRP04035 888 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 IL6P05231 212 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FAM86B2P0C5J1 330 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ANPEPP15144 967 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 CYP2A7P20853 494 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FGFR3P22607 806 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GMPSP49915 693 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PHKG1Q16816 387 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SDE2Q6IQ49 451 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ZCCHC8Q6NZY4 707 aaKnown RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PALB2Q86YC2 1186 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 SFRP1Q8N474 314 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 ASZ1Q8WWH4 475 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 EDEM1Q92611 657 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 GJD4Q96KN9 370 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-204ENST00000448183 LRRC19Q9H756 370 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PLGRKTQ9HBL7 147 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 PCDHB7Q9Y5E2 793 aa7.91□□□□□ -1.14
NEDD9-204ENST00000448183 A0A0B4J269 797 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms