RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 FSTL4Q6MZW2 842 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SDCCAG8Q86SQ7 713 aaPredicted RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 UNC93AQ86WB7 457 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 ERO1BQ86YB8 467 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 APPL2Q8NEU8 664 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SCYL1Q96KG9 808 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 ARPC5LQ9BPX5 153 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SLC39A10Q9ULF5 831 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 POMPQ9Y244 141 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 ZBTB14O43829 449 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 ITGAXP20702 1163 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 HOXA11P31270 313 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 CCR10P46092 362 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 RNF111Q6ZNA4 994 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 SIX6OS1Q8N1H7 587 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 RNF148Q8N7C7 305 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 SNX27Q96L92 541 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 C11orf84Q9BUA3 381 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 C20orf96Q9NUD7 363 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 VANGL2Q9ULK5 521 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 POLR2AP24928 1970 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 FAM72CH0Y354 149 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 LTFP02788 710 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 COX4I1P13073 169 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 ACADSBP45954 432 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 AQP4P55087 323 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 MED21Q13503 144 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 FAM72AQ5TYM5 149 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 FAM72DQ6L9T8 149 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 CTU1Q7Z7A3 348 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 FAM72BQ86X60 149 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHC1-210ENST00000448116 MAPK15Q8TD08 544 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 C16orf70Q9BSU1 422 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 NAT9Q9BTE0 207 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 HUS1O60921 280 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 BEST1O76090 585 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 CRABP2P29373 138 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 AVPR1AP37288 418 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 GSTA3Q16772 222 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 EML3Q32P44 896 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 DCAF4L1Q3SXM0 396 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 GRTP1Q5TC63 336 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 LENG8Q96PV6 779 aaPredicted RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 CPNE1Q99829 537 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 SIKE1Q9BRV8 207 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
SHC1-210ENST00000448116 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 USP3Q9Y6I4 520 aa13.19□□□□□ -0.3
SHC1-210ENST00000448116 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
SHC1-210ENST00000448116 TOMM70O94826 608 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 C2P06681 752 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 CHRNGP07510 517 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 ERCC2P18074 760 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 NUDT2P50583 147 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 RPS6KA3P51812 740 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 KLF10Q13118 480 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 FSCBQ5H9T9 825 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 CYS1Q717R9 158 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
SHC1-210ENST00000448116 LINC01465Q8N7H1 131 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 KLHL4Q9C0H6 718 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 MROH8Q9H579 483 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 SSX2IPQ9Y2D8 614 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 SNX10Q9Y5X0 201 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
SHC1-210ENST00000448116 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
SHC1-210ENST00000448116 PHGDHO43175 533 aaKnown RBP13.18□□□□□ -0.3
SHC1-210ENST00000448116 MPSTP25325 297 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms