RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PIK3R6Q5UE93 754 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 ZNF276Q8N554 614 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 CNTD1Q8N815 330 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 HIPK3Q9H422 1215 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 OGDHLQ9ULD0 1010 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 USP15Q9Y4E8 981 aaPredicted RBP17.87■□□□□ 0.45
SMC6-206ENST00000446852 E9PAM4 449 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 LPXNO60711 386 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 KRT37O76014 449 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 SNRPAP09012 282 aaKnown RBP17.87■□□□□ 0.45
SMC6-206ENST00000446852 LIG3P49916 1009 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 GPR17Q13304 367 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 CYS1Q717R9 158 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 SPATA21Q7Z572 469 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 VAT1Q99536 393 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 PPP1R12CQ9BZL4 782 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 SLCO1B3Q9NPD5 702 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 MPP6Q9NZW5 540 aa17.87■□□□□ 0.45
SMC6-206ENST00000446852 MYLKQ15746 1914 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 ARHGAP42A6NI28 874 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 HOXA2O43364 376 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 TBX18O95935 607 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 CXCL10P02778 98 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 HTR7P34969 479 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 TUBP50607 506 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
SMC6-206ENST00000446852 MRPL9Q9BYD2 267 aaKnown RBP17.86■□□□□ 0.45
SMC6-206ENST00000446852 SLC39A8Q9C0K1 460 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 CATSPERBQ9H7T0 1116 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 RFPL1O75677 317 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 YWHAQP27348 245 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 MLLT6P55198 1093 aaPredicted RBP17.86■□□□□ 0.45
SMC6-206ENST00000446852 ZNF33AQ06730 810 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 NIPAL4Q0D2K0 466 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 EFEMP1Q12805 493 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 MGAT5BQ3V5L5 792 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 ITPRIPL1Q6GPH6 555 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 PRSS55Q6UWB4 352 aaPredicted RBP17.86■□□□□ 0.45
SMC6-206ENST00000446852 CES3Q6UWW8 571 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 ARHGAP18Q8N392 663 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 ATPAF2Q8N5M1 289 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 USP33Q8TEY7 942 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 FBXO32Q969P5 355 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 TSGA13Q96PP4 275 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 PITPNM3Q9BZ71 974 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
SMC6-206ENST00000446852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.85■□□□□ 0.45
SMC6-206ENST00000446852 CCT8L1PA6NM43 557 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 MAFKO60675 156 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 CCL5P13501 91 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 ETV4P43268 484 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 TBX4P57082 545 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 COG7P83436 770 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 NRG1Q02297 640 aaPredicted RBP17.85■□□□□ 0.45
SMC6-206ENST00000446852 DEFB128Q7Z7B8 93 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 CCNJLQ8IV13 435 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 SPPL2BQ8TCT7 592 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 LRRC8CQ8TDW0 803 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 TTC17Q96AE7 1141 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 NAT9Q9BTE0 207 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 CASS4Q9NQ75 786 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 UBP1Q9NZI7 540 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 IL1RAPL1Q9NZN1 696 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 COL4A6Q14031 1691 aa17.85■□□□□ 0.45
SMC6-206ENST00000446852 ERI2A8K979 691 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 CCNCP24863 283 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 TAF10Q12962 218 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 SMAD1Q15797 465 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 RASIP1Q5U651 963 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 CDHR3Q6ZTQ4 885 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 OTOP3Q7RTS5 596 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 APOL2Q9BQE5 337 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 TTPALQ9BTX7 342 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMC6-206ENST00000446852 PRKAG3Q9UGI9 489 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 WDR91A4D1P6 747 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 KRT38O76015 456 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 DHRS4L1P0CG22 281 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 CCNB1P14635 433 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 ELAVL2Q12926 359 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 DUSP4Q13115 394 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 SEPT7Q16181 437 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 LGSNQ5TDP6 509 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 MROH9Q5TGP6 573 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 AFMIDQ63HM1 303 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 MARK2Q7KZI7 788 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 ANKRD33Q7Z3H0 272 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 ZNF683Q8IZ20 524 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMC6-206ENST00000446852 LZTR1Q8N653 840 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 RTL3Q8N8U3 475 aaKnown RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 ZNF75CPQ92670 426 aaPredicted RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 C1orf74Q96LT6 269 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 FCRL3Q96P31 734 aaPredicted RBP17.84■□□□□ 0.45
SMC6-206ENST00000446852 FAM111AQ96PZ2 611 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 ABCF3Q9NUQ8 709 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 CLIC5Q9NZA1 410 aa17.84■□□□□ 0.45
SMC6-206ENST00000446852 VANGL2Q9ULK5 521 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms