RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 GEN1Q17RS7 908 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 CCDC157Q569K6 752 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 LARP1BQ659C4 914 aaKnown RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SCARA5Q6ZMJ2 495 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 CCDC73Q6ZRK6 1079 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 BEND4Q6ZU67 534 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 ACOT1Q86TX2 421 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 FAM124AQ86V42 546 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SLC2A14Q8TDB8 520 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 PRCCQ92733 491 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SYAP1Q96A49 352 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SIPA1Q96FS4 1042 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 NUP58Q9BVL2 599 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 PANK2Q9BZ23 570 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 NRSN2Q9GZP1 204 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 FBXO44Q9H4M3 255 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 C6orf106Q9H6K1 298 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 CYP4F12Q9HCS2 524 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 AGPAT3Q9NRZ7 376 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 OSER1Q9NX31 292 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 THAP10Q9P2Z0 257 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 LSM7Q9UK45 103 aaKnown RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SMC3Q9UQE7 1217 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SLC27A6Q9Y2P4 619 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SRPRBQ9Y5M8 271 aaKnown RBP6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 CLIC4Q9Y696 253 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 TEX15Q9BXT5 2789 aa6.1□□□□□ -1.43
HMGN1P36-201ENST00000446623 TP53BP1Q12888 1972 aaPredicted RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 A0A087X0B3 334 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 PLK4O00444 970 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 KCNK3O14649 394 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 MDM4O15151 490 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 EIF3DO15371 548 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 TGFB1I1O43294 461 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 CLSTN1O94985 981 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 B3GALT4O96024 378 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 RARGP13631 454 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 CCDC130P13994 396 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 MAP4P27816 1152 aaKnown RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ITPKBP27987 946 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 SSTR4P31391 388 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 MAP3K7CLP57077 242 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 LRP8Q14114 963 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 RABEP1Q15276 862 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ZNF699Q32M78 642 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 C10orf120Q5SQS8 335 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 KLHDC10Q6PID8 442 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 DHRS13Q6UX07 377 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 STXBP4Q6ZWJ1 553 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 EPM2AIP1Q7L775 607 aaPredicted RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ANKS1BQ7Z6G8 1248 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 CCDC65Q8IXS2 484 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 XXYLT1Q8NBI6 393 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 RBBP8NLQ8NC74 664 aaPredicted RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ZNF507Q8TCN5 953 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 UCMAQ8WVF2 138 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 SORCS1Q8WY21 1168 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 SNX19Q92543 992 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 JAKMIP2Q96AA8 810 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ELMO3Q96BJ8 720 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 PIWIL1Q96J94 861 aaKnown RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 TRIM56Q9BRZ2 755 aaKnown RBP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 SDCBP2Q9H190 292 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 PCED1AQ9H1Q7 454 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 NMUR1Q9HB89 426 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 CSNK1G1Q9HCP0 422 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 TM9SF3Q9HD45 589 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 FAM49BQ9NUQ9 324 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ELOVL2Q9NXB9 296 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 HMGXB4Q9UGU5 601 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 NUDT5Q9UKK9 219 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 RNF112Q9ULX5 631 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 SCML2Q9UQR0 700 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 ANKRD6Q9Y2G4 727 aa6.09□□□□□ -1.43
HMGN1P36-201ENST00000446623 UNC79Q9P2D8 2635 aa6.09□□□□□ -1.44
HMGN1P36-201ENST00000446623 COL5A1P20908 1838 aaPredicted RBP6.09□□□□□ -1.44
HMGN1P36-201ENST00000446623 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 VPS37CA5D8V6 355 aaPredicted RBP6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 HHLA1C9JL84 531 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 E9PAM4 449 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 H0Y8X5 98 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 CLIC2O15247 247 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 TLX3O43711 291 aaPredicted RBP6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 PCDHGA12O60330 932 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 STC2O76061 302 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 TIAF1O95411 115 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 VNN1O95497 513 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 TGFB1P01137 390 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 KLKB1P03952 638 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 EPHX1P07099 455 aa6.08□□□□□ -1.44
HMGN1P36-201ENST00000446623 FAM200BP0CF97 657 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms