RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 REEP2Q9BRK0 252 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 NOD2Q9HC29 1040 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 ERVK-5Q9HDB9 667 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 TMEM160Q9NX00 188 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 KLQ9UEF7 1012 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 GJD2Q9UKL4 321 aa5□□□□□ -1.61
HMGB3P6-201ENST00000444896 LRRFIP2Q9Y608 721 aaKnown RBP5□□□□□ -1.61
HMGB3P6-201ENST00000444896 RRN3P2A6NIE6 340 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 KCNJ18B7U540 433 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 DHX16O60231 1041 aaKnown RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 PRR35P0CG20 571 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 PKMP14618 531 aaKnown RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 HOXB9P17482 250 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 HOXD9P28356 352 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 ARHGAP25P42331 645 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 MVDP53602 400 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SSBP2P81877 361 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 GHRHRQ02643 423 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 STIM1Q13586 685 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SLC12A1Q13621 1099 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 ALKBH1Q13686 389 aaKnown RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 THOC5Q13769 683 aaKnown RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 TAF12Q16514 161 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SRSF7Q16629 238 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 MAP3K21Q5TCX8 1036 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 KAT2AQ92830 837 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 KAT2BQ92831 832 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 MASTLQ96GX5 879 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 MAELQ96JY0 434 aaKnown RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SIGLEC11Q96RL6 698 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 PIMREGQ9BSJ6 248 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SCNM1Q9BWG6 230 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 FRMD8Q9BZ67 464 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 PI4KBQ9UBF8 816 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 FBXO4Q9UKT5 387 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 CCDC88BA6NC98 1476 aa4.99□□□□□ -1.61
HMGB3P6-201ENST00000444896 SETD1BQ9UPS6 1966 aaKnown RBP4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 C17orf100A8MU93 164 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 EYA2O00167 538 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 CTSAP10619 480 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 CDK4P11802 303 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 TFEBP19484 476 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 RHAGQ02094 409 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 UBE3AQ05086 875 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 CHRNDQ07001 517 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 ANKRD1Q15327 319 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 HSP90AB4PQ58FF6 505 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 ARL13AQ5H913 290 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 ANO7Q6IWH7 933 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 SLC30A9Q6PML9 568 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 SLC2A7Q6PXP3 512 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 RNF144BQ7Z419 303 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 VPS52Q8N1B4 723 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 FAM47BQ8NA70 645 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 USP38Q8NB14 1042 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 USP13Q92995 863 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 TRIM31Q9BZY9 425 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 PRSS22Q9GZN4 317 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 TMEM248Q9NWD8 314 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 ARL15Q9NXU5 204 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 PDP2Q9P2J9 529 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 PGAP2Q9UHJ9 254 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 CD207Q9UJ71 328 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 GTF2A1LQ9UNN4 478 aa4.98□□□□□ -1.61
HMGB3P6-201ENST00000444896 TCRBV7S3A2A0A539 114 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 E5RJQ4 531 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 NPHP1O15259 732 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 KLK10O43240 276 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 USP12O75317 370 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 CD63P08962 238 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 CPA1P15085 419 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 KELP23276 732 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 ABCG1P45844 678 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 SLC12A2P55011 1212 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 SLC9C1Q4G0N8 1177 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 C10orf76Q5T2E6 689 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 DENND1BQ6P3S1 775 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 TMTC1Q8IUR5 882 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 TMEM217Q8N7C4 229 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 Q9N2J8 555 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 TMEM184CQ9NVA4 438 aa4.97□□□□□ -1.61
HMGB3P6-201ENST00000444896 COL3A1P02461 1466 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 KCNU1A8MYU2 1149 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ADAM10O14672 748 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 UGDHO60701 494 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 TYK2P29597 1187 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 CPA2P48052 419 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 RPS6KA3P51812 740 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 RPS13P62277 151 aaKnown RBP4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 TLE2Q04725 743 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZNF91Q05481 1191 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 DLGAP5Q15398 846 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 EZH2Q15910 746 aaKnown RBP4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 GXYLT1Q4G148 440 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 MIDNQ504T8 468 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZNF626Q68DY1 528 aa4.96□□□□□ -1.62
HMGB3P6-201ENST00000444896 DEF8Q6ZN54 512 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms