RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 NCF2P19878 526 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 PBLDP30039 288 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 BMPR1AP36894 532 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 KDSRQ06136 332 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 PARP6Q2NL67 630 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 DAB2IPQ5VWQ8 1189 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 NPNTQ6UXI9 565 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 OSTM1Q86WC4 334 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.4□□□□□ -0.11e-5■■□□□ 13.3
SMARCA4-204ENST00000444061 GBP5Q96PP8 586 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 SEMA3CQ99985 751 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 DDX23Q9BUQ8 820 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 PCDH18Q9HCL0 1135 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 INSL5Q9Y5Q6 135 aa14.4□□□□□ -0.1
SMARCA4-204ENST00000444061 A0A0A0MRY4 1105 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TAS2R40P59535 323 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 CCDC197Q8NCU1 140 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 ANKRD7Q92527 254 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SPATA13Q96N96 652 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TBL1YQ9BQ87 522 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 PCMTD2Q9NV79 361 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 PKD2L2Q9NZM6 624 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SHOC2Q9UQ13 582 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TRIM16O95361 564 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SERPIND1P05546 499 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 MYH8P13535 1937 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 NPY2RP49146 381 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 GAD2Q05329 585 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 COL24A1Q17RW2 1714 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 HABP4Q5JVS0 413 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 PTAR1Q7Z6K3 402 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 CXorf40AQ8TE69 158 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TWNKQ96RR1 684 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SRPK1Q96SB4 655 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 IARS2Q9NSE4 1012 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 CYP1A1P04798 512 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 MSH3P20585 1137 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 HADHAP40939 763 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 POM121L1PQ3SYA9 428 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 DZANK1Q9NVP4 752 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 A0A1B0GVM2 712 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TCAF2A6NFQ2 919 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 ERI2A8K979 691 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 A8MX80 341 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 RHOQP17081 205 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 HMOX2P30519 316 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 GPD2P43304 727 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 KIF19Q2TAC6 998 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 MROH9Q5TGP6 573 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TTC39BQ5VTQ0 682 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 HGSNATQ68CP4 663 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.39□□□□□ -0.114e-7■■□□□ 11.7
SMARCA4-204ENST00000444061 MLPHQ9BV36 600 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 TRIM55Q9BYV6 548 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 GPR62Q9BZJ7 368 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SIX2Q9NPC8 291 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
SMARCA4-204ENST00000444061 SUPT3HB4E1H0 165 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 SUPT3HO75486 399 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 CD86P42081 329 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 LBRQ14739 615 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PHACTR4Q8IZ21 702 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 EXOC2Q96KP1 924 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PAPPA2Q9BXP8 1791 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PDZK1P1A8MUH7 402 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 DNTTP04053 509 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 CA3P07451 260 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 SETMARQ53H47 684 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PLEKHG4Q58EX7 1191 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 ANKRD20A2Q5SQ80 823 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 ANKRD20A1Q5TYW2 823 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 FBXO25Q8TCJ0 367 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PLEKHO2Q8TD55 490 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 C8orf48Q96LL4 319 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 SCN9AQ15858 1988 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 TIMM44O43615 452 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 GJA1P17302 382 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 YBEYP58557 167 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 MOGSQ13724 837 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 MUM1Q2TAK8 710 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 FAM47EQ6ZV65 393 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms