RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF419Q96HQ0 510 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 PRICKLE1Q96MT3 831 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 SPAG5Q96R06 1193 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 LHX5Q9H2C1 402 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 SIX2Q9NPC8 291 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 XPO7Q9UIA9 1087 aaKnown RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 LUC7L2Q9Y383 392 aaKnown RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 FRYQ5TBA9 3013 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 KCNU1A8MYU2 1149 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 AKR1B15C9JRZ8 316 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 CDX4O14627 284 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 DNTTP04053 509 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 GLI1P08151 1106 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 SERPINF2P08697 491 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 COPAP53621 1224 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 RNASE9P60153 205 aaKnown RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 KCNMA1Q12791 1236 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 DRAP1Q14919 205 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 SH3PXD2AQ5TCZ1 1133 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 RNF219Q5W0B1 726 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 WDTC1Q8N5D0 677 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM35BQ8NCS4 154 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 EPS8L1Q8TE68 723 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM245Q9H330 911 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 FSCN3Q9NQT6 498 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 ZNHIT6Q9NWK9 470 aaKnown RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 WSB2Q9NYS7 404 aaPredicted RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 USP36Q9P275 1121 aaKnown RBP9.05□□□□□ -0.96
USP6NL-203ENST00000443016 SUN2Q9UH99 717 aa9.05□□□□□ -0.96
USP6NL-203ENST00000443016 ASCC3Q8N3C0 2202 aaKnown RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 MAP1BP46821 2468 aaKnown RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FAM170AA1A519 330 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 RNASEH1O60930 286 aaKnown RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 SYPP08247 313 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 UCHL3P15374 230 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 TACR2P21452 398 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CSKP41240 450 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 PITX1P78337 314 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 PTPRNQ16849 979 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 KLHDC7AQ5VTJ3 777 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FAM183BPQ6ZVS7 135 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FAM71AQ8IYT1 594 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 GANCQ8TET4 914 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 SNX19Q92543 992 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 GANQ9H2C0 597 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 AJAP1Q9UKB5 411 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CAPN11Q9UMQ6 739 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FHOD1Q9Y613 1164 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 MFAP3LO75121 409 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 GYPCP04921 128 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CCDC172P0C7W6 258 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CYP11B1P15538 503 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 NNMTP40261 264 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 NUMBP49757 651 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 KLK7P49862 253 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 POLR2FP61218 127 aaKnown RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 ZBED6P86452 979 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 SLC6A3Q01959 620 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 TTC31Q49AM3 519 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FSCBQ5H9T9 825 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 RABGAP1LQ5R372 815 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 N4BP2L1Q5TBK1 243 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 CADM4Q8NFZ8 388 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 MYEOVQ96EZ4 313 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 RPRD1AQ96P16 312 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-203ENST00000443016 SLC32A1Q9H598 525 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 ASNSD1Q9NWL6 643 aa9.04□□□□□ -0.96
USP6NL-203ENST00000443016 WDFY3Q8IZQ1 3526 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 M0QYT0 321 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 OPHN1O60890 802 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 S100BP04271 92 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ASLP04424 464 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ERBB2P04626 1255 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 CASP14P31944 242 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 TBX2Q13207 712 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 PTPN20Q4JDL3 420 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 PITRM1Q5JRX3 1037 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 PEAR1Q5VY43 1037 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 OLFML1Q6UWY5 402 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 RINLQ6ZS11 566 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 KIAA0907Q7Z7F0 614 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ERICH1Q86X53 443 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ZDHHC17Q8IUH5 632 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 ZCCHC9Q8N567 271 aaKnown RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 CPLX3Q8WVH0 158 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 TRIM44Q96DX7 344 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-203ENST00000443016 SLC2A13Q96QE2 648 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 TTYH3Q9C0H2 523 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 BTBD1Q9H0C5 482 aa9.03□□□□□ -0.96
USP6NL-203ENST00000443016 NLRC4Q9NPP4 1024 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms