RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CERS1P27544 350 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ALDH1B1P30837 517 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 HSPA1LP34931 641 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAP2K6P52564 334 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 HK3P52790 923 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 UBASH3AP57075 661 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 LOXL3P58215 753 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 RAB1AP62820 205 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 BTKQ06187 659 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SRSF4Q08170 494 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TCF15Q12870 199 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 HNRNPA0Q13151 305 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SNAPC2Q13487 334 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 PTPN14Q15678 1187 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 NPY5RQ15761 445 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 EARS2Q5JPH6 523 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 RBM20Q5T481 1227 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM160B1Q5W0V3 765 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ARL6IP4Q66PJ3 421 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 GALNT17Q6IS24 598 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ANKRD16Q6P6B7 361 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 PIK3AP1Q6ZUJ8 805 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 USP49Q70CQ1 688 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC29A4Q7RTT9 530 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 KRT27Q7Z3Y8 459 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 HEATR3Q7Z4Q2 680 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 WDR53Q7Z5U6 358 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 MTERF4Q7Z6M4 381 aaKnown RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 DAAM2Q86T65 1068 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 DPP9Q86TI2 863 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TEX11Q8IYF3 940 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 BLIDQ8IZY5 108 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 NME8Q8N427 588 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 PDILTQ8N807 584 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ACRBPQ8NEB7 543 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC148Q8NFR7 591 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBC1D16Q8TBP0 767 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 KIAA1191Q96A73 305 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 PAGE5Q96GU1 130 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 NT5C1BQ96P26 610 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAP7D2Q96T17 732 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 EYA3Q99504 573 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 TMEM47Q9BQJ4 181 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 COA1Q9GZY4 146 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ETAA1Q9NY74 926 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 FLRT1Q9NZU1 646 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF69Q9UC07 566 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 POLLQ9UGP5 575 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAD2L2Q9UI95 211 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC45A2Q9UMX9 530 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 PAXBP1Q9Y5B6 917 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 ROBO3Q96MS0 1386 aa3.76□□□□□ -1.81
HMGB3P11-201ENST00000440127 COL11A2P13942 1736 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 COL24A1Q17RW2 1714 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CACNA1SQ13698 1873 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ADGRA2Q96PE1 1338 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 BTAF1O14981 1849 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 WDR27A2RRH5 827 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 VWA3AA6NCI4 1184 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 KLRF2D3W0D1 207 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 QSOX1O00391 747 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 KPNA5O15131 536 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCP110O43303 1012 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 NCK2O43639 380 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 MGEA5O60502 916 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 JTBO76095 146 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PARP1P09874 1014 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 NR2F6P10588 404 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 TOP1P11387 765 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYF5P13349 255 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ATP1A3P13637 1013 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 NPR1P16066 1061 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 TNFSF4P23510 183 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPIFP30405 207 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPM1AP35813 382 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 LONP1P36776 959 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ABCG1P45844 678 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 GCLCP48506 637 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 PLCD1P51178 756 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 RENBPP51606 427 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCZ1BP86790 482 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCZ1P86791 482 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 DDR1Q08345 913 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 FOXF2Q12947 444 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 GRM1Q13255 1194 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 TRIM14Q14142 442 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SRSF7Q16629 238 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC4A8Q2Y0W8 1093 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ALFQ53S48 1182 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 AARS2Q5JTZ9 985 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPATA1Q5VX52 437 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ICE2Q659A1 982 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 ARMCX5Q6P1M9 558 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC30A10Q6XR72 485 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM90A1Q86YD7 464 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYLK4Q86YV6 388 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 VSTM4Q8IW00 320 aa3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCAR2Q8N163 923 aaKnown RBP3.75□□□□□ -1.81
HMGB3P11-201ENST00000440127 C4orf32Q8N8J7 132 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms