RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MAGEB18Q96M61 343 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 ENTPD7Q9NQZ7 604 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 VPS28Q9UK41 221 aa11.83□□□□□ -0.52
TRAPPC9-202ENST00000438773 MYH9P35579 1960 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CFAP73A6NFT4 308 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 SCAMP3O14828 347 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 TIMM44O43615 452 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCDC22O60826 627 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 KCNE1P15382 129 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 ATP5C1P36542 298 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCNHP51946 323 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 GJA9P57773 515 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 DUSP4Q13115 394 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 DBN1Q16643 649 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 RAP1GAP2Q684P5 730 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 OR52K1Q8NGK4 314 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 P2RY11Q96G91 374 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 YJEFN3A6XGL0 299 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 E7ENQ6 273 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MDM4O15151 490 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 ALOX15BO15296 676 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 STX7O15400 261 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 GLRA3O75311 464 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 AMHP03971 560 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 EDN1P05305 212 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MYL2P10916 166 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 OR1D2P34982 312 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CYP1B1Q16678 543 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 SLC30A9Q6PML9 568 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 FITM2Q8N6M3 262 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCDC185Q8N715 623 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 PTPRHQ9HD43 1115 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 A0A0U1RQF3 1178 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 IL1RL1Q01638 556 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 PLD1Q13393 1074 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MPP2Q14168 576 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 CXorf38Q8TB03 319 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 FGD4Q96M96 766 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 MRPL46Q9H2W6 279 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 FAM8A1Q9UBU6 413 aa11.82□□□□□ -0.52
TRAPPC9-202ENST00000438773 SERPINF2P08697 491 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 GP5P40197 560 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 SLC5A3P53794 718 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 CLDN10P78369 228 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 INCA1Q0VD86 236 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 TMEM110Q86TL2 294 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 ECHDC2Q86YB7 292 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 PSTKQ8IV42 348 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 GANCQ8TET4 914 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 CDK5RAP1Q96SZ6 601 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 ADAMTS10Q9H324 1103 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 OR6C75A6NL08 312 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 MYL4P12829 197 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 NFKB1P19838 968 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 DAOAP59103 153 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 USP41Q3LFD5 358 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 SNRNP27Q8WVK2 155 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 USP6NLQ92738 828 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 EGFL8Q99944 293 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 TTPALQ9BTX7 342 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 ATP13A1Q9HD20 1204 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 TLR5O60602 858 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 VAPBO95292 243 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 HOXA11P31270 313 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 AVPR1AP37288 418 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 GLRBP48167 497 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 KLC1Q07866 573 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 PSMD5Q16401 504 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 KIF19Q2TAC6 998 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 CMASQ8NFW8 434 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 PCDH19Q8TAB3 1148 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 DQX1Q8TE96 717 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 KCTD15Q96SI1 283 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 VCX3AQ9NNX9 186 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 ADAM28Q9UKQ2 775 aa11.81□□□□□ -0.52
TRAPPC9-202ENST00000438773 MAGEB16A2A368 324 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 PGAM1P18669 254 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CNTFP26441 200 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CYTH1Q15438 398 aa11.8□□□□□ -0.52
TRAPPC9-202ENST00000438773 CA9Q16790 459 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms