RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TRIM43BA6NCK2 446 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 URADA6NGE7 173 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GPR89AB7ZAQ6 455 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RNF103O00237 685 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 DNM1LO00429 736 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SCDO00767 359 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAGEB3O15480 346 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC25A17O43808 307 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 NMT2O60551 498 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 TLR2O60603 784 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLITRK3O94933 977 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 REC8O95072 547 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 LARGE1O95461 756 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 STAMBPO95630 424 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ERBB2P04626 1255 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ASGR1P07306 291 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HMOX1P09601 288 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GPR89BP0CG08 455 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRR35P0CG20 571 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 UBL4AP11441 157 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ALADP13716 330 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 NPPBP16860 134 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GNAT2P19087 354 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 TYMPP19971 482 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CD38P28907 300 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADSSP30520 456 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HOXC8P31273 242 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 IDUAP35475 653 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GGT5P36269 586 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HSD17B2P37059 387 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PIP4K2AP48426 406 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CAMLGP49069 296 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HARS2P49590 506 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ARFIP2P53365 341 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 POLGP54098 1239 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RARSP54136 660 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 BPIFB4P59827 614 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GMFBP60983 142 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CDK17Q00537 523 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MALLQ13021 153 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 DCTN2Q13561 401 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SPIDRQ14159 915 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 IRF3Q14653 427 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 IMMTQ16891 758 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HFEQ30201 348 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCDC40Q4G0X9 1142 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RABL3Q5HYI8 236 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GLRA4Q5JXX5 417 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM69AQ5T7M9 428 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC25A24Q6NUK1 477 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMEM154Q6P9G4 183 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 INO80CQ6PI98 192 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM111BQ6SJ93 734 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SYNE3Q6ZMZ3 975 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 INTS8Q75QN2 995 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MARK2Q7KZI7 788 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HEATR3Q7Z4Q2 680 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADCK1Q86TW2 530 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM160B2Q86V87 743 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADGRG3Q86Y34 549 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 LYSMD2Q8IV50 215 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PDCL2Q8N4E4 241 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRPL43Q8N983 215 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SPERTQ8NA61 448 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RFWD2Q8NHY2 731 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF384Q8TF68 577 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRIM43Q96BQ3 446 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RMDN1Q96DB5 314 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SUCLG2Q96I99 432 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 C16orf92Q96LL3 132 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 GBP4Q96PP9 640 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 DMRTA2Q96SC8 542 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FDXACB1Q9BRP7 624 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RTKNQ9BST9 563 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FUZQ9BT04 418 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 STRA6Q9BX79 667 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 KLHL4Q9C0H6 718 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 WNT5BQ9H1J7 359 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC25A18Q9H1K4 315 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 A1CFQ9NQ94 594 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC35C2Q9NQQ7 365 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ACSS2Q9NR19 701 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZDHHC7Q9NXF8 308 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRPL15Q9P015 296 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 HMG20BQ9P0W2 317 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 NCDNQ9UBB6 729 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CORO1CQ9ULV4 474 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 LIPT1Q9Y234 373 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 MTO1Q9Y2Z2 717 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 CHTOPQ9Y3Y2 248 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHGA5Q9Y5G8 931 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHGA1Q9Y5H4 931 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHA13Q9Y5I0 950 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 POMT1Q9Y6A1 747 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 FPGT-TNNI3KV9GXZ4 949 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 V9GYY5 206 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 COL15A1P39059 1388 aa3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF335Q9H4Z2 1342 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P12-201ENST00000438594 UBE2QL1A1L167 161 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms