RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TRPC7Q9HCX4 862 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 DZANK1Q9NVP4 752 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 TMEM51Q9NW97 253 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CWC15Q9P013 229 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CLEC1BQ9P126 229 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 HBS1LQ9Y450 684 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PCDHGC4Q9Y5F7 938 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 GOLGA6L7A0A1B0GV03 622 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF487B1APH4 448 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PGRMC1O00264 195 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 ATXN7O15265 892 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SASH3O75995 380 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 STC2O76061 302 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 MOCS2O96007 188 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC2A3P11169 496 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 MBL2P11226 248 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 GOT1P17174 413 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PFKLP17858 780 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PAFAH1B1P43034 410 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 HCAR3P49019 387 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 MLLT6P55198 1093 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC7A9P82251 487 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 COG7P83436 770 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 DLX2Q07687 328 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 DPYSQ14117 519 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 ANKRD20A8PQ5CZ79 823 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 TFDP3Q5H9I0 405 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PPP6R3Q5H9R7 873 aaPredicted RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 RARS2Q5T160 578 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 GPR158Q5T848 1215 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 CCDC181Q5TID7 509 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PIK3R6Q5UE93 754 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 MANEALQ5VSG8 457 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 KAZNQ674X7 775 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 NADSYN1Q6IA69 706 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 BBS12Q6ZW61 710 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 TRIM46Q7Z4K8 759 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 GPR149Q86SP6 731 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 C14orf80Q86SX3 495 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 VSIG1Q86XK7 387 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 MAP7D3Q8IWC1 876 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PRELID2Q8N945 189 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SPATA4Q8NEY3 305 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 ITFG1Q8TB96 612 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 C1orf74Q96LT6 269 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 CSPG4P5Q96PW8 444 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 RNF157Q96PX1 679 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 GCNAQ96QF7 691 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PRMT1Q99873 361 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF670Q9BS34 389 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SIK2Q9H0K1 926 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SMG9Q9H0W8 520 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 S1PR5Q9H228 398 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 TASP1Q9H6P5 420 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PIDD1Q9HB75 910 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 SMPD4Q9NXE4 827 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 OR12D3Q9UGF7 316 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 CDH22Q9UJ99 828 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 NEU3Q9UQ49 428 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 R3HDM2Q9Y2K5 976 aaKnown RBP7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 CPQQ9Y646 472 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 HS3ST4Q9Y661 456 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 PATJQ8NI35 1801 aa7.26□□□□□ -1.25
LSM3P3-201ENST00000436601 TRAV19A0A0A6YYK7 116 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CTAGE15A4D2H0 777 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 FAM187AA6NFU0 413 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SOBPA7XYQ1 873 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 H3BRJ5 948 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 KRIT1O00522 736 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF197O14709 1029 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CREB3O43889 395 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CST8O60676 142 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MMP20O60882 483 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 TBX10O75333 385 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 LRIG2O94898 1065 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 TJP3O95049 919 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SLU7O95391 586 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 APOEP02649 317 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CTAGE8P0CG41 777 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 BMP1P13497 986 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 HOXB8P17481 243 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CEBPBP17676 345 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 AMPD1P23109 780 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 DDX6P26196 483 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 TARSP26639 723 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC6A4P31645 630 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 LTBRP36941 435 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CETN2P41208 172 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ITIH3Q06033 890 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 C2orf54Q08AI8 447 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 AUHQ13825 339 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CBX2Q14781 532 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CCDC85BQ15834 202 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CLUL1Q15846 466 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CYP1B1Q16678 543 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms