RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 MBPP02686 304 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 GPD1P21695 349 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TACR3P29371 465 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADRA1BP35368 520 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SKIV2L2P42285 1042 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADPRHP54922 357 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CYP4F2P78329 520 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 BYSLQ13895 437 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 FNDC7Q5VTL7 733 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CFAP161Q6P656 301 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 NEK10Q6ZWH5 1172 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TMTC3Q6ZXV5 915 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SPRED1Q7Z699 444 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TMEM200AQ86VY9 491 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CHD1LQ86WJ1 897 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CCDC105Q8IYK2 499 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 LSM14AQ8ND56 463 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ETNPPLQ8TBG4 499 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CNOT9Q92600 299 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 RNFT2Q96EX2 444 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 UROC1Q96N76 676 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 GPR78Q96P69 363 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CADM1Q9BY67 442 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 OSBPL5Q9H0X9 879 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 FOXJ2Q9P0K8 574 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SH3BP4Q9P0V3 963 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SEMA5BQ9P283 1151 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 RCE1Q9Y256 329 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 PGPEP1LA6NFU8 196 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB13A6NJU9 1138 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB5A8MRT5 1133 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB4C9JG80 1138 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 F9P00740 461 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SFPQP23246 707 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PRPH2P23942 346 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 HNF1BP35680 557 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 POLD2P49005 469 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MVDP53602 400 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 RARSP54136 660 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MAMLD1Q13495 774 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PUM1Q14671 1186 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 TSTQ16762 297 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 INO80CQ6PI98 192 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 DHRS13Q6UX07 377 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 RANBP10Q6VN20 620 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 BRINP3Q76B58 766 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 FASTKD5Q7L8L6 764 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KLBQ86Z14 1044 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 DIS3L2Q8IYB7 885 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 VPS52Q8N1B4 723 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SNRNP27Q8WVK2 155 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CELF1Q92879 486 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 TIMP4Q99727 224 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 IFT27Q9BW83 186 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CPNE5Q9HCH3 593 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NSMCE4AQ9NXX6 385 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 IL1RAPL1Q9NZN1 696 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KCND2Q9NZV8 630 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PACSIN3Q9UKS6 424 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 FSD2A1L4K1 749 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PI4KAP2A4QPH2 592 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 TEX22C9J3V5 150 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB8E9PQR5 432 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PRYO14603 147 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CHRM4P08173 479 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CD63P08962 238 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PEPDP12955 493 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 COX7A2P14406 83 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 INSRRP14616 1297 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 WT1P19544 449 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GGT5P36269 586 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CACNA2D1P54289 1103 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 EIF3BP55884 814 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 DCAF7P61962 342 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 SHC2P98077 582 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 B4GALNT1Q00973 533 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 DMWDQ09019 674 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GOLGA8DPQ0D2H9 430 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 NEXNQ0ZGT2 675 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 FOXI1Q12951 378 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 ZXDCQ2QGD7 858 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 MTFR2Q6P444 385 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 KIAA1324Q6UXG2 1013 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 BRSK2Q8IWQ3 736 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 RPAP2Q8IXW5 612 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADGRF3Q8IZF5 1079 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 FAM9BQ8IZU0 186 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GHDCQ8N2G8 530 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms