RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 MBPP02686 304 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 GPD1P21695 349 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TACR3P29371 465 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADRA1BP35368 520 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SKIV2L2P42285 1042 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADPRHP54922 357 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CYP4F2P78329 520 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 BYSLQ13895 437 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 FNDC7Q5VTL7 733 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CFAP161Q6P656 301 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 NEK10Q6ZWH5 1172 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TMTC3Q6ZXV5 915 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SPRED1Q7Z699 444 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 TMEM200AQ86VY9 491 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CHD1LQ86WJ1 897 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CCDC105Q8IYK2 499 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 LSM14AQ8ND56 463 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 ETNPPLQ8TBG4 499 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CNOT9Q92600 299 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 RNFT2Q96EX2 444 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 UROC1Q96N76 676 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 GPR78Q96P69 363 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 CADM1Q9BY67 442 aaKnown RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 OSBPL5Q9H0X9 879 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 FOXJ2Q9P0K8 574 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SH3BP4Q9P0V3 963 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 SEMA5BQ9P283 1151 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 RCE1Q9Y256 329 aa4.93□□□□□ -1.62
HMGB1P45-201ENST00000435986 PGPEP1LA6NFU8 196 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB13A6NJU9 1138 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB5A8MRT5 1133 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB4C9JG80 1138 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 F9P00740 461 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SFPQP23246 707 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PRPH2P23942 346 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 HNF1BP35680 557 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 POLD2P49005 469 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MVDP53602 400 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 RARSP54136 660 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MAMLD1Q13495 774 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PUM1Q14671 1186 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 TSTQ16762 297 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 INO80CQ6PI98 192 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 DHRS13Q6UX07 377 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 RANBP10Q6VN20 620 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 BRINP3Q76B58 766 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 FASTKD5Q7L8L6 764 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KLBQ86Z14 1044 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 DIS3L2Q8IYB7 885 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 VPS52Q8N1B4 723 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 SNRNP27Q8WVK2 155 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CELF1Q92879 486 aaKnown RBP4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 TIMP4Q99727 224 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 IFT27Q9BW83 186 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CPNE5Q9HCH3 593 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 NSMCE4AQ9NXX6 385 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 IL1RAPL1Q9NZN1 696 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 KCND2Q9NZV8 630 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 PACSIN3Q9UKS6 424 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
HMGB1P45-201ENST00000435986 FSD2A1L4K1 749 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PI4KAP2A4QPH2 592 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 TEX22C9J3V5 150 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 NPIPB8E9PQR5 432 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PRYO14603 147 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CHRM4P08173 479 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CD63P08962 238 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 PEPDP12955 493 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 COX7A2P14406 83 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 INSRRP14616 1297 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 WT1P19544 449 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GGT5P36269 586 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 CACNA2D1P54289 1103 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 EIF3BP55884 814 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 DCAF7P61962 342 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 SHC2P98077 582 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 B4GALNT1Q00973 533 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 DMWDQ09019 674 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GOLGA8DPQ0D2H9 430 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 NEXNQ0ZGT2 675 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 FOXI1Q12951 378 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 ZXDCQ2QGD7 858 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 MTFR2Q6P444 385 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 KIAA1324Q6UXG2 1013 aaKnown RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 BRSK2Q8IWQ3 736 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 RPAP2Q8IXW5 612 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 ADGRF3Q8IZF5 1079 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 FAM9BQ8IZU0 186 aa4.91□□□□□ -1.62
HMGB1P45-201ENST00000435986 GHDCQ8N2G8 530 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms