RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 ASGR2P07307 311 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 SIX1Q15475 284 aaPredicted RBP17.06■□□□□ 0.32
CCDC13-202ENST00000435327 C6orf118Q5T5N4 469 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 UMODL1-AS1Q8N2C9 162 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 CCDC33Q8N5R6 958 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 CSGALNACT1Q8TDX6 532 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 C1orf54Q8WWF1 131 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 DTLQ9NZJ0 730 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 REV3LO60673 3130 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 HOXC11O43248 304 aaPredicted RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 NR2C2P49116 596 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 NDST2P52849 883 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 SLC10A2Q12908 348 aaPredicted RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 NOMO1Q15155 1222 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 RNF219Q5W0B1 726 aaPredicted RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 BZW1Q7L1Q6 419 aaKnown RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 ARHGAP12Q8IWW6 846 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 ADHFE1Q8IWW8 467 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 TP53INP2Q8IXH6 220 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 SLC44A3Q8N4M1 653 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 NAT16Q8N8M0 369 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 ATG4AQ8WYN0 398 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 SLC39A8Q9C0K1 460 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 NOL6Q9H6R4 1146 aaKnown RBP17.05■□□□□ 0.32
CCDC13-202ENST00000435327 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 CLEC4EQ9ULY5 219 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 TBC1D30Q9Y2I9 924 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
CCDC13-202ENST00000435327 ILVBLA1L0T0 632 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 ARHGAP42A6NI28 874 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 RASA4BC9J798 803 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 H7C0C1 242 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 MCF2LO15068 1137 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 RASA4O43374 803 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 CSKP41240 450 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 ATP5OP48047 213 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 YBEYP58557 167 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 GNA12Q03113 381 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 SNX1Q13596 522 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 POLD3Q15054 466 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 PDK1Q15118 436 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 ITPRIPL2Q3MIP1 535 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 RNF43Q68DV7 783 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 PRELID2Q8N945 189 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 ZNF557Q8N988 423 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 OR7D4Q8NG98 312 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 OR52K2Q8NGK3 314 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 FIBINQ8TAL6 211 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 FRMD8P1Q9BZ68 369 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 MUC3BQ9H195 1237 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 MAGEH1Q9H213 219 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 LRRC19Q9H756 370 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 KIAA1522Q9P206 1035 aaPredicted RBP17.04■□□□□ 0.32
CCDC13-202ENST00000435327 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 COL4A2P08572 1712 aa17.04■□□□□ 0.32
CCDC13-202ENST00000435327 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ARNTLO00327 626 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 PPP1R12AO14974 1030 aaPredicted RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 CACNG3O60359 315 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 PHF2O75151 1096 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 RBP3P10745 1247 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 MX2P20592 715 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 MZF1P28698 734 aaPredicted RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ACVRL1P37023 503 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ETFBP38117 255 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 NUMBP49757 651 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 PAPOLAP51003 745 aaKnown RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 OXCT1P55809 520 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ZP2Q05996 745 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 C2orf54Q08AI8 447 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 GALNT2Q10471 571 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 LMAN2Q12907 356 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 CCNG2Q16589 344 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 PARP15Q460N3 678 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ATPAF2Q8N5M1 289 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 CCNYQ8ND76 341 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 MNS1Q8NEH6 495 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 LRRN4Q8WUT4 740 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 ARHGEF2Q92974 986 aaKnown RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 MAGOHBQ96A72 148 aaKnown RBP17.03■□□□□ 0.32
CCDC13-202ENST00000435327 HMCESQ96FZ2 354 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 OLFM3Q96PB7 478 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 SPON2Q9BUD6 331 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 CARD6Q9BX69 1037 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 SLC2A11Q9BYW1 496 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 HOMER3Q9NSC5 361 aa17.03■□□□□ 0.32
CCDC13-202ENST00000435327 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms