RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 IL22Q9GZX6 179 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 WDCPQ9H6R7 721 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CSNK1G1Q9HCP0 422 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 SNX15Q9NRS6 342 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FAM105AQ9NUU6 356 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DDIT4Q9NX09 232 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ARMCX1Q9P291 453 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 COPG2Q9UBF2 871 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ZNF212Q9UDV6 495 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CPA4Q9UI42 421 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ANGPTL2Q9UKU9 493 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ARHGEF37A1IGU5 675 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FAM72CH0Y354 149 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 H0Y3Z8 333 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KCNK1O00180 336 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TM7SF2O76062 418 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ERVK-10P10266 1014 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ODC1P11926 461 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DNAJB1P25685 340 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PTDSS1P48651 473 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 HK2P52789 917 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ALDH18A1P54886 795 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 IRX4P78413 519 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 MXRA7P84157 204 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PURAQ00577 322 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 BEX3Q00994 111 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CDH17Q12864 832 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 MUM1Q2TAK8 710 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FAM72AQ5TYM5 149 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PM20D1Q6GTS8 502 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FAM72DQ6L9T8 149 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ZCCHC23Q6ZST2 131 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 STRA8Q7Z7C7 330 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 MRPL10Q7Z7H8 261 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 FAM72BQ86X60 149 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TREML1Q86YW5 311 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 DCLK2Q8N568 766 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ZMIZ2Q8NF64 920 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 RDH11Q8TC12 318 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PPP1R13LQ8WUF5 828 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PCED1BQ96HM7 432 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ZFP42Q96MM3 310 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TSNARE1Q96NA8 513 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 MTG1Q9BT17 334 aaPredicted RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 COLEC11Q9BWP8 271 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CEP41Q9BYV8 373 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 OSBPL2Q9H1P3 480 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 FLRT1Q9NZU1 646 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 STX18Q9P2W9 335 aaKnown RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 MARCOQ9UEW3 520 aaPredicted RBP10.66□□□□□ -0.7
CD44-210ENST00000434472 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ST3GAL5Q9UNP4 418 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 ANKRD6Q9Y2G4 727 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 PSAT1Q9Y617 370 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CDY2AQ9Y6F7 541 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
CD44-210ENST00000434472 TSC2P49815 1807 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 MYBPHLA2RUH7 354 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 ARHGAP42A6NI28 874 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 GPR182O15218 404 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 NVLO15381 856 aaKnown RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 USP17L7P0C7H9 530 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 KCNA4P22459 653 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 PRDX6P30041 224 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 POLD2P49005 469 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 RAB27AP51159 221 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 BLMHQ13867 455 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 RCN2Q14257 317 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 RCN1Q15293 331 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 ACSBG2Q5FVE4 666 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 FSCBQ5H9T9 825 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 ARMC3Q5W041 872 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 C10orf107Q8IVU9 208 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 APLFQ8IW19 511 aaPredicted RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 KLHDC8BQ8IXV7 354 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 RNF169Q8NCN4 708 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 RBM15BQ8NDT2 890 aaKnown RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 SOCS4Q8WXH5 440 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 TEKT5Q96M29 485 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 FAM161BQ96MY7 647 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 APBA2Q99767 749 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 ACBD6Q9BR61 282 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 C20orf27Q9GZN8 174 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 TKTL2Q9H0I9 626 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 ZNF395Q9H8N7 513 aaPredicted RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 TMEM216Q9P0N5 145 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 SLC17A6Q9P2U8 582 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 DNAJB4Q9UDY4 337 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 OR12D3Q9UGF7 316 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 DSEQ9UL01 958 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 PLA2G4CQ9UP65 541 aa10.65□□□□□ -0.7
CD44-210ENST00000434472 AAR2Q9Y312 384 aaKnown RBP10.65□□□□□ -0.7
CD44-210ENST00000434472 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms