RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SLC39A8Q9C0K1 460 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 BRD8Q9H0E9 1235 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 SPHK2Q9NRA0 654 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 YBEYP58557 167 aaPredicted RBP27.15■■□□□ 1.94
TMEM248-205ENST00000433271 DHX34Q14147 1143 aaKnown RBP27.15■■□□□ 1.94
TMEM248-205ENST00000433271 FYB2Q5VWT5 728 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 RNF43Q68DV7 783 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 LRRC49Q8IUZ0 686 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 CCDC33Q8N5R6 958 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 GRK7Q8WTQ7 553 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 TFB1MQ8WVM0 346 aaKnown RBP27.15■■□□□ 1.94
TMEM248-205ENST00000433271 SLCO2A1Q92959 643 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 NUP205Q92621 2012 aa27.15■■□□□ 1.94
TMEM248-205ENST00000433271 RAMP2O60895 175 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 LUC7L3O95232 432 aaKnown RBP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 HOXD9P28356 352 aaPredicted RBP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 GARSP41250 739 aaKnown RBP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 IFNAR2P48551 515 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 DR1Q01658 176 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 FCHO2Q0JRZ9 810 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 EML3Q32P44 896 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 PARP15Q460N3 678 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 GLE1Q53GS7 698 aaKnown RBP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 SLC45A4Q5BKX6 768 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 PARM1Q6UWI2 310 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 MTSS1LQ765P7 747 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 ST13P5Q8NFI4 369 aaPredicted RBP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 BHMTQ93088 406 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 CCDC114Q96M63 670 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 QKIQ96PU8 341 aaKnown RBP eCLIP27.14■■□□□ 1.94
TMEM248-205ENST00000433271 LGMNQ99538 433 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 TMEM121Q9BTD3 319 aa27.14■■□□□ 1.94
TMEM248-205ENST00000433271 BCLAF3A2AJT9 711 aaKnown RBP27.13■■□□□ 1.93
TMEM248-205ENST00000433271 H0Y626 953 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 DFFAO00273 331 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 STIP1P31948 543 aaKnown RBP27.13■■□□□ 1.93
TMEM248-205ENST00000433271 POLD3Q15054 466 aaPredicted RBP27.13■■□□□ 1.93
TMEM248-205ENST00000433271 LY6G5CQ5SRR4 150 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 C8orf74Q6P047 294 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 RHBDF2Q6PJF5 856 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 CDKL3Q8IVW4 592 aaPredicted RBP27.13■■□□□ 1.93
TMEM248-205ENST00000433271 CARNMT1Q8N4J0 409 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 CCNYQ8ND76 341 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 FGF14Q92915 247 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 HDAC11Q96DB2 347 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 FAM83CQ9BQN1 747 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 LRRC1Q9BTT6 524 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 MARK1Q9P0L2 795 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 EYSQ5T1H1 3165 aa27.13■■□□□ 1.93
TMEM248-205ENST00000433271 ILVBLA1L0T0 632 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 RASA4BC9J798 803 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 RASA4O43374 803 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ECI2O75521 394 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ECEL1O95672 775 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PENKP01210 267 aaPredicted RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PTGIRP43119 386 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ZNF33AQ06730 810 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PRKD1Q15139 912 aaPredicted RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PDGFRLQ15198 375 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 TEX35Q5T0J7 233 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ASIC4Q96FT7 647 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 TSGA13Q96PP4 275 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 BBS2Q9BXC9 721 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 MAGEH1Q9H213 219 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 C10orf88Q9H8K7 445 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 CFAP69A5D8W1 941 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ARHGAP42A6NI28 874 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 RAD51CO43502 376 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PSMC3P17980 439 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PAPOLAP51003 745 aaKnown RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PPIDQ08752 370 aaKnown RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 CDH18Q13634 790 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 DHCR24Q15392 516 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 LEXMQ3ZCV2 418 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 CXorf57Q6NSI4 855 aaKnown RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 CCDC70Q6NSX1 233 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ZNF783Q6ZMS7 281 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 B4GALNT4Q76KP1 1039 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 CCDC117Q8IWD4 279 aaPredicted RBP27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ALLCQ8N6M5 410 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 DEPDC1BQ8WUY9 529 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 UBXN4Q92575 508 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ATP2A3Q93084 1043 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 KXD1Q9BQD3 176 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PLA2G2FQ9BZM2 168 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 USP29Q9HBJ7 922 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 PLK2Q9NYY3 685 aa27.12■■□□□ 1.93
TMEM248-205ENST00000433271 ANHXE9PGG2 379 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 TTI1O43156 1089 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 ZNF189O75820 626 aaPredicted RBP27.11■■□□□ 1.93
TMEM248-205ENST00000433271 GAS8O95995 478 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 RHOCP08134 193 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 GNA12Q03113 381 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 AP1B1Q10567 949 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 ANO4Q32M45 955 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 TRIM68Q6AZZ1 485 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 GSTA5Q7RTV2 222 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 MFN1Q8IWA4 741 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 ATPAF2Q8N5M1 289 aa27.11■■□□□ 1.93
TMEM248-205ENST00000433271 OR52K2Q8NGK3 314 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms