RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SNCBQ16143 134 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 HSF5Q4G112 596 aaPredicted RBP14.28□□□□□ -0.12
HOXC4-202ENST00000430889 AFMIDQ63HM1 303 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 FAM91A1Q658Y4 838 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 ITPRIPL1Q6GPH6 555 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 KYAT3Q6YP21 454 aaKnown RBP14.28□□□□□ -0.12
HOXC4-202ENST00000430889 C4orf50Q6ZRC1 276 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 CLNKQ7Z7G1 428 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 COLGALT2Q8IYK4 626 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 KIF2BQ8N4N8 673 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 ARMC2Q8NEN0 867 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 CDKL2Q92772 493 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 CERS2Q96G23 380 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 MECRQ9BV79 373 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 LRRC40Q9H9A6 602 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 SAR1AQ9NR31 198 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 ABCC13Q9NSE7 274 aa14.28□□□□□ -0.12
HOXC4-202ENST00000430889 KCNU1A8MYU2 1149 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 USP1O94782 785 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 POLBP06746 335 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 ITGA2BP08514 1039 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 BST1Q10588 318 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 PPP2R5DQ14738 602 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 SLC24A5Q71RS6 500 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 INPP5DQ92835 1189 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 CASP10Q92851 521 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 ZNF419Q96HQ0 510 aaPredicted RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 PGLYRP2Q96PD5 576 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 CPNE1Q99829 537 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 IQCGQ9H095 443 aaKnown RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 NMUR1Q9HB89 426 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.12
HOXC4-202ENST00000430889 ABT1Q9ULW3 272 aaKnown RBP14.27□□□□□ -0.12
HOXC4-202ENST00000430889 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TPP1O14773 563 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 USP12O75317 370 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 PAGE1O75459 146 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 CCNCP24863 283 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 GP5P40197 560 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 SP3Q02447 781 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 MSANTD2Q6P1R3 559 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 RNF180Q86T96 592 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 AGAP3Q96P47 875 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 IL12RB2Q99665 862 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TMEM120AQ9BXJ8 343 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TLE6Q9H808 572 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 SRRDQ9UH36 339 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 LNPEPQ9UIQ6 1025 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 DCTN4Q9UJW0 460 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 MTO1Q9Y2Z2 717 aaKnown RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 RPS6KL1Q9Y6S9 549 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 MOXD2PA6NHM9 499 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 WASH4PA8MWX3 477 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 CHUKO15111 745 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 FGF10O15520 208 aaPredicted RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 PLIN3O60664 434 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 GLRA3O75311 464 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 ERVK-10P10266 1014 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 NPY2RP49146 381 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 CSRP3P50461 194 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 COG7P83436 770 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 INSCQ1MX18 579 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TAF1BQ53T94 588 aaPredicted RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 GRTP1Q5TC63 336 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 GLB1LQ6UWU2 654 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 CES3Q6UWW8 571 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 ARHGAP36Q6ZRI8 547 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 MTDHQ86UE4 582 aaKnown RBP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 ZNF683Q8IZ20 524 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 FUBP3Q96I24 572 aaKnown RBP eCLIP14.26□□□□□ -0.13
HOXC4-202ENST00000430889 TRPV6Q9H1D0 765 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 NOD2Q9HC29 1040 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 IL37Q9NZH6 218 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 BFARQ9NZS9 450 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 ZFP69BQ9UJL9 534 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 SOX13Q9UN79 622 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 SCML2Q9UQR0 700 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
HOXC4-202ENST00000430889 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
HOXC4-202ENST00000430889 MAFKO60675 156 aa14.25□□□□□ -0.13
HOXC4-202ENST00000430889 JCHAINP01591 159 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms