RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PBKQ96KB5 322 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 WDR24Q96S15 920 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 PNKPQ96T60 521 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 PSMB7Q99436 277 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 P2RY13Q9BPV8 354 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 MUTYHQ9UIF7 546 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 GGA2Q9UJY4 613 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 RAD54BQ9Y620 910 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 CHD5Q8TDI0 1954 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 UNC80Q8N2C7 3258 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 ARHGAP42A6NI28 874 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 CES2O00748 559 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 MFSD11O43934 449 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 TJP3O95049 919 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 SLC34A2O95436 690 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 PYGMP11217 842 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 IL4RP24394 825 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 HLA-FP30511 346 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 OPRD1P41143 372 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 CSKP41240 450 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 SOX9P48436 509 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 NDST2P52849 883 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 YBEYP58557 167 aaPredicted RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 GNA12Q03113 381 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 LMAN2Q12907 356 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 ZNF211Q13398 564 aaPredicted RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 SLC44A4Q53GD3 710 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 BZW1Q7L1Q6 419 aaKnown RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 PQLC3Q8N755 202 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 DCAF4L2Q8NA75 395 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 NAP1L3Q99457 506 aaPredicted RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 MAGEH1Q9H213 219 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 ABCB8Q9NUT2 735 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 VPS28Q9UK41 221 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 FBXO10Q9UK96 956 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 SNX12Q9UMY4 172 aa11.29□□□□□ -0.6
CHD4-202ENST00000430771 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
CHD4-202ENST00000430771 NYNRINQ9P2P1 1898 aaKnown RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 APOC4-APOC2K7ER74 178 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 PPP1R12AO14974 1030 aaPredicted RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 NCAM2O15394 837 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 CST8O60676 142 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 KAT7O95251 611 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 APOC2P02655 101 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 ASLP04424 464 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 KRT10P13645 584 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 MX2P20592 715 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 DRD1P21728 446 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 CD70P32970 193 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 GRIA2P42262 883 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 NR2C2P49116 596 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 DYNLT1P63172 113 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 SULT2A1Q06520 285 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 GRSF1Q12849 480 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHD4-202ENST00000430771 POLD3Q15054 466 aaPredicted RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 FUT11Q495W5 492 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 PITRM1Q5JRX3 1037 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 SYT10Q6XYQ8 523 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 NPWQ8N729 165 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 PLD5Q8N7P1 536 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 FAM3CQ92520 227 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 P2RY11Q96G91 374 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 SP110Q9HB58 689 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 CLEC4EQ9ULY5 219 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 SAR1BQ9Y6B6 198 aa11.28□□□□□ -0.6
CHD4-202ENST00000430771 MUC22E2RYF6 1773 aaPredicted RBP11.28□□□□□ -0.6
CHD4-202ENST00000430771 ZSCAN5CA6NGD5 496 aaPredicted RBP11.27□□□□□ -0.61
CHD4-202ENST00000430771 RASA4BC9J798 803 aa11.27□□□□□ -0.61
CHD4-202ENST00000430771 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.61
CHD4-202ENST00000430771 DFFAO00273 331 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms