RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 EFHC1Q5JVL4 640 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 LRSAM1Q6UWE0 723 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 APCDD1Q8J025 514 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 CCAR2Q8N163 923 aaKnown RBP15.37■□□□□ 0.05
MSH5-208ENST00000429846 PTPRN2Q92932 1015 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 SPAG5Q96R06 1193 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 PRMT1Q99873 361 aaKnown RBP15.37■□□□□ 0.05
MSH5-208ENST00000429846 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 DKK4Q9UBT3 224 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 APEX2Q9UBZ4 518 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 SLCO3A1Q9UIG8 710 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 GOT1P17174 413 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 MZF1P28698 734 aaPredicted RBP15.36■□□□□ 0.05
MSH5-208ENST00000429846 CD38P28907 300 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 PSMD8P48556 350 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 ADPRHP54922 357 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 SNX16P57768 344 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 AADATQ8N5Z0 425 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 SHC3Q92529 594 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 RPL10LQ96L21 214 aaKnown RBP15.36■□□□□ 0.05
MSH5-208ENST00000429846 SLC6A18Q96N87 628 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 SLC2A13Q96QE2 648 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 FAM129BQ96TA1 746 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 ELF4Q99607 663 aaPredicted RBP15.36■□□□□ 0.05
MSH5-208ENST00000429846 KDM4CQ9H3R0 1056 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 DDIT4Q9NX09 232 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 FTSJ1Q9UET6 329 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 PCDHGC3Q9UN70 934 aa15.36■□□□□ 0.05
MSH5-208ENST00000429846 APC2O95996 2303 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 BECN2A8MW95 431 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 SLC7A4O43246 635 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 IL1BP01584 269 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 NUDT1P36639 197 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 USP8P40818 1118 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 STK19P49842 368 aaPredicted RBP15.35■□□□□ 0.05
MSH5-208ENST00000429846 PITX1P78337 314 aaPredicted RBP15.35■□□□□ 0.05
MSH5-208ENST00000429846 SMAD1Q15797 465 aaKnown RBP15.35■□□□□ 0.05
MSH5-208ENST00000429846 DEFB106AQ8N104 65 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 STK40Q8N2I9 435 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 OR14C36Q8NHC7 312 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 RNF34Q969K3 372 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 FAM131CQ96AQ9 280 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 CPXM1Q96SM3 734 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 AASDHPPTQ9NRN7 309 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 GPSM3Q9Y4H4 160 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 DSPP15924 2871 aaKnown RBP15.35■□□□□ 0.05
MSH5-208ENST00000429846 ATRXP46100 2492 aa15.35■□□□□ 0.05
MSH5-208ENST00000429846 GOLGA4Q13439 2230 aaKnown RBP15.35■□□□□ 0.05
MSH5-208ENST00000429846 FREM2Q5SZK8 3169 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 KCNK3O14649 394 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 ALOX15BO15296 676 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 LATO43561 262 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 CDK4P11802 303 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 DRD3P35462 400 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 ARRB1P49407 418 aaPredicted RBP15.34■□□□□ 0.05
MSH5-208ENST00000429846 PTK2Q05397 1052 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 KCNJ12Q14500 433 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 TAF5Q15542 800 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 EXOC3L4Q17RC7 722 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 FAM46CQ5VWP2 391 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 CXorf57Q6NSI4 855 aaKnown RBP15.34■□□□□ 0.05
MSH5-208ENST00000429846 FBXL22Q6P050 247 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 OXR1Q8N573 874 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 FRS2Q8WU20 508 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 OR8D1Q8WZ84 308 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 RPRD1AQ96P16 312 aaPredicted RBP15.34■□□□□ 0.05
MSH5-208ENST00000429846 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 KIAA1468Q9P260 1216 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 SLC25A13Q9UJS0 675 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 PCDHGA1Q9Y5H4 931 aa15.34■□□□□ 0.05
MSH5-208ENST00000429846 A0A1W2PR77 199 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 GOLGA8CPA6NN73 597 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 E9PAM4 449 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 CLDN11O75508 207 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 DAB1O75553 588 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 WNT1P04628 370 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 SLC9A1P19634 815 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 IL9RQ01113 521 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 GJB7Q6PEY0 223 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 OLFML1Q6UWY5 402 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 C11orf57Q6ZUT1 292 aaPredicted RBP15.33■□□□□ 0.04
MSH5-208ENST00000429846 SLC26A9Q7LBE3 791 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
MSH5-208ENST00000429846 ZDHHC17Q8IUH5 632 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 WDTC1Q8N5D0 677 aa15.33■□□□□ 0.04
MSH5-208ENST00000429846 MDM1Q8TC05 714 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms