RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	CEP83	Q9Y592	693 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	LOC400499	M0QZD8	3231 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738		F5H5T6	163 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	UCHL3	P15374	230 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	ABCB4	P21439	1286 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	NOS2	P35228	1153 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	MATK	P42679	507 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	CTSO	P43234	321 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	GABRB2	P47870	512 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	ST8SIA6	P61647	398 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	BNC1	Q01954	994 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	RAPGEF1	Q13905	1077 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	HLA-B	Q31612	363 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	OTUD1	Q5VV17	481 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZNF776	Q68DI1	518 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	FBXL22	Q6P050	247 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	APCDD1	Q8J025	514 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	BAHD1	Q8TBE0	780 aa	Predicted RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	GPT2	Q8TD30	523 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	CDC6	Q99741	560 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	DKK4	Q9UBT3	224 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	FNDC3A	Q9Y2H6	1198 aa	Known RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	RAX	Q9Y2V3	346 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	PCDHGB2	Q9Y5G2	931 aa		18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738	GCN1	Q92616	2671 aa	Known RBP	18.3	■□□□□ 0.52
MRPL28-203	ENST00000429738		A0A1B0GVM2	712 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	TCAF2	A6NFQ2	919 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	SIN3B	O75182	1162 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	DKK1	O94907	266 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	MOCS3	O95396	460 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	DNTT	P04053	509 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	MTA1	Q13330	715 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLC12A1	Q13621	1099 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	C9orf64	Q5T6V5	341 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	CDKAL1	Q5VV42	579 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	FAM124A	Q86V42	546 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	CCAR2	Q8N163	923 aa	Known RBP	18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	TMEM35B	Q8NCS4	154 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	RHBDD1	Q8TEB9	315 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	NT5C3B	Q969T7	300 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	NPY6R	Q99463	290 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	C6orf106	Q9H6K1	298 aa	Predicted RBP	18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	SCUBE2	Q9NQ36	999 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	TOR4A	Q9NXH8	423 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	EIF2B4	Q9UI10	523 aa	Known RBP	18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	SCML1	Q9UN30	329 aa		18.29	■□□□□ 0.52
MRPL28-203	ENST00000429738	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	TARSL2	A2RTX5	802 aa	Known RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738		F8VZ95	297 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	ATXN1L	P0C7T5	689 aa	Known RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	SCNN1A	P37088	669 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	PLK1	P53350	603 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	ECT2L	Q008S8	904 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	SUZ12	Q15022	739 aa	Known RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	TTC31	Q49AM3	519 aa	Predicted RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	C5orf22	Q49AR2	442 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	RABGAP1L	Q5R372	815 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	CXorf57	Q6NSI4	855 aa	Known RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	USP30	Q70CQ3	517 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	CIR1	Q86X95	450 aa	Predicted RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	IGSF8	Q969P0	613 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	PGAP3	Q96FM1	320 aa	Predicted RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	STK33	Q9BYT3	514 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	BTBD1	Q9H0C5	482 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	GAN	Q9H2C0	597 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	SGK2	Q9HBY8	427 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	TAB2	Q9NYJ8	693 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	RRN3	Q9NYV6	651 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	COX16	Q9P0S2	106 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLCO3A1	Q9UIG8	710 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	HS3ST4	Q9Y661	456 aa		18.28	■□□□□ 0.52
MRPL28-203	ENST00000429738	TTC34	A8MYJ7	566 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	C10orf142	B7Z368	130 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738		M0QYT0	321 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	PES1	O00541	588 aa	Known RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	FLRT2	O43155	660 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	SEMA4F	O95754	770 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	MZF1	P28698	734 aa	Predicted RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	VASP	P50552	380 aa	Predicted RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	NME3	Q13232	169 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	AUH	Q13825	339 aa	Known RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	NOP9	Q86U38	636 aa	Known RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	DHX40	Q8IX18	779 aa	Known RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	EPS8L1	Q8TE68	723 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	PTPRN2	Q92932	1015 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	C18orf8	Q96DM3	657 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	ALG14	Q96F25	216 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	PABPC3	Q9H361	631 aa	Known RBP	18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	SYNC	Q9H7C4	482 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	OSGEP	Q9NPF4	335 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	PIGV	Q9NUD9	493 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	ARHGEF38	Q9NXL2	777 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLCO1B1	Q9Y6L6	691 aa		18.27	■□□□□ 0.52
MRPL28-203	ENST00000429738	DOCK4	Q8N1I0	1966 aa		18.26	■□□□□ 0.51
MRPL28-203	ENST00000429738	EDDM13	A0A1B0GTR0	161 aa		18.26	■□□□□ 0.51
MRPL28-203	ENST00000429738		A0A1B0GVT2	93 aa		18.26	■□□□□ 0.51
MRPL28-203	ENST00000429738		I6L893	689 aa	Predicted RBP	18.26	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms