RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 C2CD4DB7Z1M9 353 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 HOXD9P28356 352 aaPredicted RBP17.52■□□□□ 0.39
LINC00887-203ENST00000429578 HTR4Q13639 388 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 PDGFRLQ15198 375 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 RNF43Q68DV7 783 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 RHBDF2Q6PJF5 856 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 YAF2Q8IY57 180 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 PLCD3Q8N3E9 789 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 C12orf50Q8NA57 414 aaPredicted RBP17.52■□□□□ 0.39
LINC00887-203ENST00000429578 C1orf54Q8WWF1 131 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 P2RY11Q96G91 374 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 CARD6Q9BX69 1037 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 LRRC19Q9H756 370 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 C11orf16Q9NQ32 467 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 RBM12Q9NTZ6 932 aaKnown RBP17.52■□□□□ 0.39
LINC00887-203ENST00000429578 MARK1Q9P0L2 795 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 TBC1D30Q9Y2I9 924 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 NUMBLQ9Y6R0 609 aa17.52■□□□□ 0.39
LINC00887-203ENST00000429578 COL4A3Q01955 1670 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 MYO18AQ92614 2054 aaKnown RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 CTAGE15A4D2H0 777 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 DCXO43602 365 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 LUC7L3O95232 432 aaKnown RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 MAP3K6O95382 1288 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 NFATC1O95644 943 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 PENKP01210 267 aaPredicted RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 CTAGE8P0CG41 777 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 NDST2P52849 883 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 ZNF177Q13360 481 aaPredicted RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 C6orf118Q5T5N4 469 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 AFMIDQ63HM1 303 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 SETD3Q86TU7 594 aaPredicted RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 CTAGE6Q86UF2 777 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 CTAGE4Q8IX94 777 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 SLC35B2Q8TB61 432 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 ATG4AQ8WYN0 398 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 ATP2A3Q93084 1043 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 BHMTQ93088 406 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 ZFYVE19Q96K21 471 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 OLFM3Q96PB7 478 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 FAM118BQ9BPY3 351 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
LINC00887-203ENST00000429578 BBS2Q9BXC9 721 aa17.51■□□□□ 0.39
LINC00887-203ENST00000429578 H0Y626 953 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 MCF2LO15068 1137 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 NCAM2O15394 837 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 PHF2O75151 1096 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CYP17A1P05093 508 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 YBEYP58557 167 aaPredicted RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 XRCC4Q13426 336 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 GRM2Q14416 872 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 DHCR24Q15392 516 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 ANO4Q32M45 955 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 DRICH1Q6PGQ1 229 aaPredicted RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 ARHGAP12Q8IWW6 846 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CARNMT1Q8N4J0 409 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CELF6Q96J87 481 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 TRMT61BQ9BVS5 477 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 NOL6Q9H6R4 1146 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 PLK2Q9NYY3 685 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 NEDD8-MDP1E9PL57 170 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CHADO15335 359 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 LIASO43766 372 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 RAMP2O60895 175 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 ADH1CP00326 375 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CHRNA3P32297 505 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 EIF3EP60228 445 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 GALNT2Q10471 571 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CDH18Q13634 790 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 CXorf57Q6NSI4 855 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 ZC3H18Q86VM9 953 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 MFN1Q8IWA4 741 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 TP53INP2Q8IXH6 220 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 NETO2Q8NC67 525 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 NKD2Q969F2 451 aaPredicted RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 MAGOHBQ96A72 148 aaKnown RBP17.5■□□□□ 0.39
LINC00887-203ENST00000429578 SLC39A8Q9C0K1 460 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 DNPEPQ9ULA0 475 aa17.5■□□□□ 0.39
LINC00887-203ENST00000429578 ILVBLA1L0T0 632 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 RBP3P10745 1247 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 TYRP14679 529 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 ARSAP15289 507 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 MX2P20592 715 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 GDI1P31150 447 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 GAD2Q05329 585 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 SNX1Q13596 522 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
LINC00887-203ENST00000429578 PDK1Q15118 436 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 PARP15Q460N3 678 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 CCDC117Q8IWD4 279 aaPredicted RBP17.49■□□□□ 0.39
LINC00887-203ENST00000429578 FIBINQ8TAL6 211 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 NXPE3Q969Y0 559 aa17.49■□□□□ 0.39
LINC00887-203ENST00000429578 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms