RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FAM47BQ8NA70 645 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TFAP2CQ92754 450 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CALML4Q96GE6 196 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 RTKNQ9BST9 563 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 VPS37BQ9H9H4 285 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TIGARQ9NQ88 270 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FBXO8Q9NRD0 319 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TAS2R7Q9NYW3 318 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 LY75O60449 1722 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 GTPBP10A4D1E9 387 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CENPXA8MT69 81 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 PI4K2BG5E9Z4 385 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 HTRA2O43464 458 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 AKAP10O43572 662 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SULT1B1O43704 296 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 NMT2O60551 498 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM155BO75949 473 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SEC14L2O76054 403 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNRPAP09012 282 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DBTP11182 482 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 L1CAMP32004 1257 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 KRT20P35900 424 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CLCNKBP51801 687 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 RACK1P63244 317 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 RHAGQ02094 409 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF33BQ06732 778 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 BST1Q10588 318 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TROAPQ12815 778 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNTA1Q13424 505 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 PPP2R5DQ14738 602 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 NRF1Q16656 503 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 KCNT1Q5JUK3 1230 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SYCE2Q6PIF2 218 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRIM72Q6ZMU5 477 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DBX2Q6ZNG2 339 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DENND5BQ6ZUT9 1274 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 TXNRD3Q86VQ6 643 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CDR2LQ86X02 465 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 BLIDQ8IZY5 108 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZCCHC7Q8N3Z6 543 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DCPSQ96C86 337 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC10A4Q96EP9 437 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM111AQ96PZ2 611 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 CHID1Q9BWS9 393 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 BRIP1Q9BX63 1249 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLC13A1Q9BZW2 595 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAM96AQ9H5X1 160 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 SIX2Q9NPC8 291 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 NARFQ9UHQ1 456 aa9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDC42BPA-206ENST00000429440 C16orf96A6NNT2 1141 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 PI15O43692 258 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 MFN2O95140 757 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 NELFEP18615 380 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 PIK3R1P27986 724 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SOX5P35711 763 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAD23AP54725 363 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 GPLD1P80108 840 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TMPRSS15P98073 1019 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRIM32Q13049 653 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF677Q86XU0 584 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 REXO1Q8N1G1 1221 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF786Q8N393 782 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CADM2Q8N3J6 435 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 MFSD4AQ8N468 514 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CCDC24Q8N4L8 307 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR6F1Q8NGZ6 308 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 E2F7Q96AV8 911 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 MTMR12Q9C0I1 747 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 DNAI2Q9GZS0 605 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TRIM39Q9HCM9 518 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SIRPGQ9P1W8 387 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 COPG2Q9UBF2 871 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 RIMKLBQ9ULI2 386 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TCAF1Q9Y4C2 921 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 RIPK3Q9Y572 518 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CLDN3O15551 220 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 GAS2O43903 313 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNNO75324 88 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SLITRK5O94991 958 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 OR5F1O95221 314 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 MT-ND3P03897 115 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TALDO1P37837 337 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CACNB3P54284 484 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 ILF2Q12905 390 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CEP55Q53EZ4 464 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 TEX44Q53QW1 395 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 YIF1BQ5BJH7 314 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 CORO6Q6QEF8 472 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
CDC42BPA-206ENST00000429440 SH2D5Q6ZV89 423 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms