RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CNGA2Q16280 664 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 NAPEPLDQ6IQ20 393 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 APCDD1Q8J025 514 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 LGI2Q8N0V4 545 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 FAM149B1Q96BN6 582 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 TSG101Q99816 390 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 C10orf142B7Z368 130 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 CALCAP01258 141 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 CKMT2P17540 419 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 RXRGP48443 463 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 ILKQ13418 452 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 ELAVL3Q14576 367 aaKnown RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 SFMBT2Q5VUG0 894 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 CHSY1Q86X52 802 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 SPATS2Q86XZ4 545 aaKnown RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 SNIP1Q8TAD8 396 aaKnown RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 PTPRN2Q92932 1015 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 HSFY1Q96LI6 401 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 ZSWIM1Q9BR11 485 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 GOLPH3LQ9H4A5 285 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 ERVMER34-1Q9H9K5 563 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 ARMCX3Q9UH62 379 aaPredicted RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 XPO7Q9UIA9 1087 aaKnown RBP18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 NAALADL1Q9UQQ1 740 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 DOCK9Q9BZ29 2069 aa18.92■□□□□ 0.62
UPK3BP1-201ENST00000428678 LATO43561 262 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 BRINP1O60477 761 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 ZNF202O95125 648 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 APOEP02649 317 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 FYNP06241 537 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 VAV1P15498 845 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 GLDCP23378 1020 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 MAT2AP31153 395 aaKnown RBP18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 DRD3P35462 400 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 NNMTP40261 264 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 PRCPP42785 496 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 NUCB2P80303 420 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 FKBP3Q00688 224 aaKnown RBP18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 NNTQ13423 1086 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 STILQ15468 1287 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 RAP1GAP2Q684P5 730 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 PRPF39Q86UA1 669 aaKnown RBP18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 TAC4Q86UU9 113 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 MFSD2AQ8NA29 543 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 FGF11Q92914 225 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 SLC35C1Q96A29 364 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 SLC39A13Q96H72 371 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 NT5C1BQ96P26 610 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 TJP2Q9UDY2 1190 aa18.91■□□□□ 0.62
UPK3BP1-201ENST00000428678 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 SDC3O75056 442 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 TACR2P21452 398 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 METAP1P53582 386 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 ANKRD40Q6AI12 368 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 KANSL1Q7Z3B3 1105 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 PPM1KQ8N3J5 372 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 KAT5Q92993 513 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 ST7Q9NRC1 585 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 CYTH4Q9UIA0 394 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 CLCA2Q9UQC9 943 aa18.9■□□□□ 0.62
UPK3BP1-201ENST00000428678 A0A1W2PQ27 194 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 A0A1W2PQ64 194 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 CAPN9O14815 690 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 SART1O43290 800 aaKnown RBP18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 RTN2O75298 545 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 PDGFRAP16234 1089 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 ACTN2P35609 894 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 FMO5P49326 533 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 INSM1Q01101 510 aaPredicted RBP18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 PNOCQ13519 176 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 ZC3H12AQ5D1E8 599 aaKnown RBP18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 GPR155Q7Z3F1 870 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 IQCHQ86VS3 1027 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 SPAG5Q96R06 1193 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 RMND1Q9NWS8 449 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 MAST4O15021 2626 aa18.89■□□□□ 0.61
UPK3BP1-201ENST00000428678 PMS1P54277 932 aaKnown RBP18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 SLC12A1Q13621 1099 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 STAT4Q14765 748 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 PROX2Q3B8N5 592 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 POM121L1PQ3SYA9 428 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 SYPL2Q5VXT5 272 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 KDM7AQ6ZMT4 941 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 DSG4Q86SJ6 1040 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 CIR1Q86X95 450 aaPredicted RBP18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 DCBLD1Q8N8Z6 715 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 LSM14AQ8ND56 463 aaKnown RBP18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 RFFLQ8WZ73 363 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 OR8D1Q8WZ84 308 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 BTN2A3PQ96KV6 586 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 KDM4CQ9H3R0 1056 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 ARHGAP20Q9P2F6 1191 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 DMTF1Q9Y222 760 aa18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 TDRD6O60522 2096 aaKnown RBP18.88■□□□□ 0.61
UPK3BP1-201ENST00000428678 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
UPK3BP1-201ENST00000428678 F5H5T6 163 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms