RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 BLACEA4D250 179 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 EME2A4GXA9 379 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 EIF3DO15371 548 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 SLC7A4O43246 635 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 RNGTTO60942 597 aaKnown RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 TCEA3O75764 348 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 CLSTN1O94985 981 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 IL1BP01584 269 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 SRPRAP08240 638 aaKnown RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 P4HA1P13674 534 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 SLC5A2P31639 672 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 SLC6A4P31645 630 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 AP3M2P53677 418 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 CDKN3Q16667 212 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 FAM133BQ5BKY9 247 aaKnown RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 PM20D1Q6GTS8 502 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 MMS22LQ6ZRQ5 1243 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 NDRG1Q92597 394 aaKnown RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 DUSP23Q9BVJ7 150 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 NT5C1AQ9BXI3 368 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-209ENST00000428450 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
DDX39B-209ENST00000428450 UBE4BO95155 1302 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 CCDC187A0A096LP49 1063 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 CPED1A4D0V7 1026 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 ASS1P00966 412 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 FBN2P35556 2912 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 ELAVL3Q14576 367 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 SKIDA1Q1XH10 827 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 SETMARQ53H47 684 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 AGBL4Q5VU57 503 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 CRTC1Q6UUV9 634 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 PTRH1Q86Y79 214 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 C12orf56Q8IXR9 622 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 ZNF557Q8N988 423 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 OR13H1Q8NG92 308 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 HTR3CQ8WXA8 447 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 TAF4BQ92750 862 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 MYEOVQ96EZ4 313 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 NOX5Q96PH1 765 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 OLA1Q9NTK5 396 aaKnown RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 EVA1BQ9NVM1 165 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 FBXO2Q9UK22 296 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-209ENST00000428450 SARDHQ9UL12 918 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
DDX39B-209ENST00000428450 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 H3BQV1 296 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 SLC31A1O15431 190 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 MSI1O43347 362 aaKnown RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 ZBED1O96006 694 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 VAV1P15498 845 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 WT1P19544 449 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 AFMP43652 599 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 TAS2R38P59533 333 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 CYP4F2P78329 520 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 DLG4P78352 724 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 ECT2LQ008S8 904 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 CNTN1Q12860 1018 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 ZACNQ401N2 412 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 PERM1Q5SV97 790 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 ZCCHC8Q6NZY4 707 aaKnown RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 CCDC73Q6ZRK6 1079 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 ZNF564Q8TBZ8 553 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 RPL10LQ96L21 214 aaKnown RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 PRICKLE1Q96MT3 831 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 MYOCQ99972 504 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 STIM2Q9P246 746 aa11.89□□□□□ -0.51
DDX39B-209ENST00000428450 SRPRBQ9Y5M8 271 aaKnown RBP11.89□□□□□ -0.51
DDX39B-209ENST00000428450 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 CELSR2Q9HCU4 2923 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 PLD2O14939 933 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 IRAK2O43187 625 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 EXOC3O60645 756 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 KRT38O76015 456 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 IGLV3-27P01718 113 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 PRLRP16471 622 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 TRIM21P19474 475 aaKnown RBP11.88□□□□□ -0.51
DDX39B-209ENST00000428450 CASRP41180 1078 aa11.88□□□□□ -0.51
DDX39B-209ENST00000428450 STAT6P42226 847 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms