RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 DGKKQ5KSL6 1271 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 RNF219Q5W0B1 726 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 KIAA0907Q7Z7F0 614 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 KATNAL2Q8IYT4 538 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 AHI1Q8N157 1196 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 UBL4BQ8N7F7 174 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 OR52K2Q8NGK3 314 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 LMAN1LQ9HAT1 526 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ZNF487B1APH4 448 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 K7EQS6 105 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 DCLK1O15075 740 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 TIMM44O43615 452 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 KIF5CO60282 957 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RAMP2O60895 175 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 CHRNB1P11230 501 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 POLR2EP19388 210 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 IL4RP24394 825 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 MZF1P28698 734 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PEX5P50542 639 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PLK1P53350 603 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RWDD2BP57060 319 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 EIF4HQ15056 248 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PLEKHG6Q3KR16 790 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 FBXO43Q4G163 708 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 HS1BP3Q53T59 392 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PITRM1Q5JRX3 1037 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 MBLAC2Q68D91 279 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ADIPOR2Q86V24 386 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 VSIG1Q86XK7 387 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 SFTPA1Q8IWL2 248 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 UCMAQ8WVF2 138 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ALG14Q96F25 216 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RBM41Q96IZ5 413 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RNF157Q96PX1 679 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 FEM1AQ9BSK4 669 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 MAK16Q9BXY0 300 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 CIPCQ9C0C6 399 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 ELOVL2Q9NXB9 296 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 MTF2Q9Y483 593 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 VCANP13611 3396 aa13.2□□□□□ -0.3
CCHCR1-205ENST00000428174 C3orf70A6NLC5 250 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 DDX3YO15523 660 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 ETFBP38117 255 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 CETN2P41208 172 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 DNA2P51530 1060 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 NDST2P52849 883 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 YBEYP58557 167 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 GNA12Q03113 381 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 CCINQ13939 588 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 RPS6KA1Q15418 735 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 FUT11Q495W5 492 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 EMC10Q5UCC4 262 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 MFSD7Q6UXD7 560 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 SPOCD1Q6ZMY3 1216 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 RFX6Q8HWS3 928 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 CCDC50Q8IVM0 306 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 SYNPOQ8N3V7 929 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 PCDH19Q8TAB3 1148 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 FAF2Q96CS3 445 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 HES6Q96HZ4 224 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 SPON2Q9BUD6 331 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 ETNK2Q9NVF9 386 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 OR51B4Q9Y5P0 310 aa13.19□□□□□ -0.3
CCHCR1-205ENST00000428174 DOCK4Q8N1I0 1966 aa13.18□□□□□ -0.3
CCHCR1-205ENST00000428174 MIA3Q5JRA6 1907 aa13.18□□□□□ -0.3
CCHCR1-205ENST00000428174 A0A0D9SEW6 157 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms