RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TPTEP56180 551 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 GXYLT1Q4G148 440 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 SH2D4BQ5SQS7 431 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 TMEM81Q6P7N7 255 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 KLHL35Q6PF15 583 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 RP9Q8TA86 221 aaKnown RBP4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 XAGE5Q8WWM1 108 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 INTS12Q96CB8 462 aaKnown RBP4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 PRR11Q96HE9 360 aaPredicted RBP4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 CCDC34Q96HJ3 373 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 ZWILCHQ9H900 591 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 RPGRIP1LQ68CZ1 1315 aa4.9□□□□□ -1.63
NUDCD1-202ENST00000427660 A0A1W2PQ09 198 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 HSPA4LO95757 839 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 ZNF8P17098 575 aaPredicted RBP4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 COMTP21964 271 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 TBXAS1P24557 533 aaPredicted RBP4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 GCH1P30793 250 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 DPP6P42658 865 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 CLCN2P51788 898 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 PRPF4BQ13523 1007 aaKnown RBP4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 RAB41Q5JT25 222 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 ADGRA1Q86SQ6 560 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 GALNT13Q8IUC8 556 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 LAS2Q8IYD9 372 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 TEX11Q8IYF3 940 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 PLD5Q8N7P1 536 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 KCTD6Q8NC69 237 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 C11orf65Q8NCR3 313 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 SMARCE1Q969G3 411 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 VMP1Q96GC9 406 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 PGBD1Q96JS3 809 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 KLHL15Q96M94 604 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 TEX12Q9BXU0 123 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 TRIM31Q9BZY9 425 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 PDE7BQ9NP56 450 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 AKIP1Q9NQ31 210 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 ABHD10Q9NUJ1 306 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 PPP4R1LQ9P1A2 415 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 CEP72Q9P209 647 aa4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 SUCLA2Q9P2R7 463 aaPredicted RBP4.89□□□□□ -1.63
NUDCD1-202ENST00000427660 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 FRMD3A2A2Y4 597 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 FYB1O15117 783 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 HBP1O60381 514 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 RARGP13631 454 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 BMPR1AP36894 532 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 OAZ1P54368 228 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 RAE1P78406 368 aaKnown RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 E2F1Q01094 437 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 ABHD18Q0P651 414 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 RESTQ13127 1097 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SCARB2Q14108 478 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 UBAP2Q5T6F2 1119 aaKnown RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 GARNL3Q5VVW2 1013 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 TTI2Q6NXR4 508 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 DPY19L3Q6ZPD9 716 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 KDELC2Q7Z4H8 507 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 BRSK2Q8IWQ3 736 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 TOR1AIP2Q8NFQ8 470 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 MYCBPAPQ8TBZ2 947 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 LPIN2Q92539 896 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SNX18Q96RF0 628 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 STRA6Q9BX79 667 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SH2D4AQ9H788 454 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SFXN1Q9H9B4 322 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 MRGBPQ9NV56 204 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 IL1RAPL1Q9NZN1 696 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 EHD3Q9NZN3 535 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 CC2D2AQ9P2K1 1620 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 C17orf113A0A1B0GUU1 675 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 FAM237BA0A1B0GVD1 139 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 CES2O00748 559 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 LDLRAD4O15165 306 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 LPXNO60711 386 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 TBCAO75347 108 aaKnown RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 NCR1O76036 304 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 FARP2O94887 1054 aaPredicted RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 PDE8BO95263 885 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 OR2C1O95371 312 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 C1RP00736 705 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SCG2P13521 617 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 HOXB9P17482 250 aaPredicted RBP4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SLC8A1P32418 973 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 PBX3P40426 434 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 GPC5P78333 572 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 SLC18A3Q16572 532 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 GSTA3Q16772 222 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 ERCC6LQ2NKX8 1250 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 LRCH2Q5VUJ6 765 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 MTFR2Q6P444 385 aa4.88□□□□□ -1.63
NUDCD1-202ENST00000427660 ARHGAP12Q8IWW6 846 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms