RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 EID3Q8N140 333 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TMEM86AQ8N2M4 240 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 KIAA1143Q96AT1 154 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 KIFC1Q9BW19 673 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TARS2Q9BW92 718 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 VPS45Q9NRW7 570 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PFDN2Q9UHV9 154 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ATPIF1Q9UII2 106 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ZNF780BQ9Y6R6 833 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FAM25AB3EWG3 89 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FAM25CB3EWG5 89 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FAM25GB3EWG6 89 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 F8VZ95 297 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TBL1XO60907 577 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FTH1P02794 183 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 HSD17B3P37058 310 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FMO5P49326 533 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 POLE2P56282 527 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 KRR1Q13601 381 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 CUL2Q13617 745 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 RASGRP3Q8IV61 690 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SLC22A9Q8IVM8 553 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 COL26A1Q96A83 441 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 STRADBQ9C0K7 418 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CYP3A43Q9HB55 503 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ING3Q9NXR8 418 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PSMC3IPQ9P2W1 217 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 HPS5Q9UPZ3 1129 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SLC9A8Q9Y2E8 581 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 LRCH1Q9Y2L9 728 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SETD1BQ9UPS6 1966 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 TRIM49BA6NDI0 452 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 C9J4A7 227 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 LSM1O15116 133 aaKnown RBP5.84□□□□□ -1.48
HERC4-206ENST00000427635 MAGEB3O15480 346 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 KERAO60938 352 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ATG13O75143 517 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 EPN2O95208 641 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ENO1P06733 434 aaKnown RBP5.84□□□□□ -1.48
HERC4-206ENST00000427635 HDCP19113 662 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 POU1F1P28069 291 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 SOX11P35716 441 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 CBX5P45973 191 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 PIK3CGP48736 1102 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ABRQ12979 859 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 PTK7Q13308 1070 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 LY6KQ17RY6 165 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ZNF618Q5T7W0 954 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 PCNX4Q63HM2 1172 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 SLC27A1Q6PCB7 646 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 PAGE2Q7Z2X7 111 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 EFCAB3Q8N7B9 438 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ZNF563Q8TA94 476 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 LRRC39Q96DD0 335 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 ISCA1Q9BUE6 129 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 SPRTNQ9H040 489 aaPredicted RBP5.84□□□□□ -1.48
HERC4-206ENST00000427635 ASCC2Q9H1I8 757 aaPredicted RBP5.84□□□□□ -1.48
HERC4-206ENST00000427635 C11orf49Q9H6J7 331 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 DMTF1Q9Y222 760 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 COLEC10Q9Y6Z7 277 aa5.84□□□□□ -1.48
HERC4-206ENST00000427635 USP42Q9H9J4 1324 aaKnown RBP5.84□□□□□ -1.48
HERC4-206ENST00000427635 MFAP3LO75121 409 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 GIMD1P0DJR0 217 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CPEP16870 476 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ZNF445P59923 1031 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PSMC6P62333 389 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MYBPC1Q00872 1141 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MEA1Q16626 185 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CASP12Q6UXS9 341 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 LRRC69Q6ZNQ3 347 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 AMIGO1Q86WK6 493 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 CCNJLQ8IV13 435 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 OR52L1Q8NGH7 329 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 IL12RB2Q99665 862 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 OLFM1Q99784 485 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 FDXACB1Q9BRP7 624 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 ENOPH1Q9UHY7 261 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 VAV3Q9UKW4 847 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SMG5Q9UPR3 1016 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 ERVK-11Q9UQG0 969 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 HCN4Q9Y3Q4 1203 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MED14O60244 1454 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SLC28A1O00337 649 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PEX12O00623 359 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CCL16O15467 120 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SUPT7LO94864 414 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SNRPAP09012 282 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 SLC35G4P0C7Q5 338 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PRKAR2AP13861 404 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 PTPN9P43378 593 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 KCNJ5P48544 419 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 LAMTOR4Q0VGL1 99 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ATP6AP1LQ52LC2 224 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 KRT73Q86Y46 540 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 WDR49Q8IV35 697 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 STK40Q8N2I9 435 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms