RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 C17orf80Q9BSJ5 609 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 TRIM54Q9BYV2 358 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 MS4A7Q9GZW8 240 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 CCDC68Q9H2F9 335 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 PLSCR4Q9NRQ2 329 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 ARGLU1Q9NWB6 273 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 IFT80Q9P2H3 777 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 NFKBIL1Q9UBC1 381 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 DNMT3BQ9UBC3 853 aaKnown RBP2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 TMCC3Q9ULS5 477 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 GPR34Q9UPC5 381 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 CORO2BQ9UQ03 480 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 SNX13Q9Y5W8 968 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 LMTK3Q96Q04 1460 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 BCORL1Q5H9F3 1711 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 RICTORQ6R327 1708 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 RTEL1-TNFRSF6BF6WH68 1400 aa2.76□□□□□ -1.97
R3HDM1-205ENST00000425804 EIF2AK4Q9P2K8 1649 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DUOX2Q9NRD8 1548 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TSPY2A6NKD2 308 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 A6NLC8 198 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MYO1CO00159 1063 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 FRS3O43559 492 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 NCK2O43639 380 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DKC1O60832 514 aaKnown RBP eCLIP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TJP3O95049 919 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 INMTO95050 263 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 PARP1P09874 1014 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TSPY3P0CV98 308 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TSPY8P0CW00 308 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 IDEP14735 1019 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 LRPAP1P30533 357 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 THBS4P35443 961 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MMP14P50281 582 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 AGFG1P52594 562 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 GAS1P54826 345 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TSPY1Q01534 308 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 NEXNQ0ZGT2 675 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 KRTAP24-1Q3LI83 254 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 RILPL1Q5EBL4 403 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 CCDC158Q5M9N0 1113 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 SLC10A5Q5PT55 438 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 GPATCH4Q5T3I0 446 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 HECTD3Q5T447 861 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 LMBRD2Q68DH5 695 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 APOA5Q6Q788 366 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 BCDIN3DQ7Z5W3 292 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 KCTD20Q7Z5Y7 419 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 UBE2Q1Q7Z7E8 422 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DAAM2Q86T65 1068 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 GAS2L3Q86XJ1 694 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TMTC1Q8IUR5 882 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MMP21Q8N119 569 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MPP5Q8N3R9 675 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ARL6IP6Q8N6S5 226 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ZNF713Q8N859 430 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ARL10Q8N8L6 244 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 BPIFB1Q8TDL5 484 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ADAMTS18Q8TE60 1221 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 UCMAQ8WVF2 138 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 BRI3BPQ8WY22 251 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MAML1Q92585 1016 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 PPP2R3CQ969Q6 453 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 HVCN1Q96D96 273 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 TBC1D31Q96DN5 1066 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MTFMTQ96DP5 389 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MOGAT1Q96PD6 335 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 SNX18Q96RF0 628 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MPHOSPH8Q99549 860 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 BAG1Q99933 345 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 SDF4Q9BRK5 362 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DPCDQ9BVM2 203 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 STK31Q9BXU1 1019 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MRPL9Q9BYD2 267 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 CXorf56Q9H5V9 222 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DBNDD1Q9H9R9 158 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 JMJD4Q9H9V9 463 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 SMURF2Q9HAU4 748 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 PNPLA8Q9NP80 782 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ITM2CQ9NQX7 267 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 OLA1Q9NTK5 396 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 MRGBPQ9NV56 204 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 PIH1D1Q9NWS0 290 aaKnown RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 NAP1L2Q9ULW6 460 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 CEP83Q9Y592 693 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 PCDHGB2Q9Y5G2 931 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 DENND4BO75064 1496 aaPredicted RBP2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ABCC5O15440 1437 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 ERBINQ96RT1 1412 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 YEATS2Q9ULM3 1422 aa2.75□□□□□ -1.97
R3HDM1-205ENST00000425804 KANK1Q14678 1352 aa2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 RAB3GAP2Q9H2M9 1393 aa2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 KIF15Q9NS87 1388 aa2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 INO80Q9ULG1 1556 aaPredicted RBP2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 SPAG9O60271 1321 aaKnown RBP2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 USP19O94966 1318 aa2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 ATP7AQ04656 1500 aa2.74□□□□□ -1.97
R3HDM1-205ENST00000425804 ZFYVE16Q7Z3T8 1539 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms