RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 IFI35P80217 286 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 SARNPP82979 210 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 SKOR1P84550 965 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 RAP1GAP2Q684P5 730 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 TMC7Q7Z402 723 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 TDRPQ86YL5 185 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 ANKMY2Q8IV38 441 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 KLHDC8BQ8IXV7 354 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 ATPAF2Q8N5M1 289 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 DEPDC1BQ8WUY9 529 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 IGSF8Q969P0 613 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 GORASP1Q9BQQ3 440 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 NACA2Q9H009 215 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 STMN4Q9H169 189 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 GBA3Q9H227 469 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 IL21Q9HBE4 155 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 KLHL8Q9P2G9 620 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 LGALS13Q9UHV8 139 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 NOVA2Q9UNW9 492 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 CHD7Q9P2D1 2997 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 TLDC2A0PJX2 215 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 DFFAO00273 331 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 MATN3O15232 486 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 SPAG6O75602 509 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 CXCL14O95715 111 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 OLFM2O95897 454 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 F11P03951 625 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 CD68P34810 354 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 PHBP35232 272 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 ELK3P41970 407 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 SLCO1A2P46721 670 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 HARS2P49590 506 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 IRAK1P51617 712 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 PABPC1LQ4VXU2 614 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 ALFQ53S48 1182 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 TIGD7Q6NT04 549 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 C3orf62Q6ZUJ4 267 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 IGDCC3Q8IVU1 814 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 RIBC1Q8N443 379 aaPredicted RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 PDCD7Q8N8D1 485 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 KLHL5Q96PQ7 755 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 IL12RB2Q99665 862 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 RNF38Q9H0F5 515 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 MTIF3Q9H2K0 278 aaKnown RBP15.57■□□□□ 0.08
ACTB-204ENST00000425660 VPS37BQ9H9H4 285 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
ACTB-204ENST00000425660 RWDD3Q9Y3V2 267 aa15.57■□□□□ 0.08
ACTB-204ENST00000425660 C2orf78A6NCI8 922 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 ERI2A8K979 691 aaKnown RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 ZBTB24O43167 697 aaPredicted RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 ACSL4O60488 711 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 CNTN5O94779 1100 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 SUN1O94901 812 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 CCNB1P14635 433 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 SYN1P17600 705 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 SSTR1P30872 391 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 MAGOHP61326 146 aaKnown RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 MTM1Q13496 603 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 FAM133BQ5BKY9 247 aaKnown RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 DNAJC21Q5F1R6 531 aaKnown RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 KCTD11Q693B1 232 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 ITPRIPL1Q6GPH6 555 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 LRRC8BQ6P9F7 803 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 ARHGAP36Q6ZRI8 547 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 CNTD1Q8N815 330 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 MRPL43Q8N983 215 aaKnown RBP15.56■□□□□ 0.08
ACTB-204ENST00000425660 SIGLEC10Q96LC7 697 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 TCF25Q9BQ70 676 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 ACSS3Q9H6R3 686 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 RABGEF1Q9UJ41 708 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 CHMP2BQ9UQN3 213 aa15.56■□□□□ 0.08
ACTB-204ENST00000425660 EXOC1LA0A1B0GW35 172 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 SMIM23A6NLE4 172 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 C5orf67F2Z3F1 127 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 STC2O76061 302 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 TACR2P21452 398 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 GCAP28676 217 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 GRIA1P42261 906 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 MAPKAPK2P49137 400 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 SLC11A2P49281 568 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
ACTB-204ENST00000425660 ERVFC1P60507 584 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 UBE3AQ05086 875 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 CCDC149Q6ZUS6 474 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 TFAP2DQ7Z6R9 452 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 CHSY1Q86X52 802 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 PALM2Q8IXS6 379 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 ARFGAP2Q8N6H7 521 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 MAML1Q92585 1016 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 ZNF419Q96HQ0 510 aaPredicted RBP15.55■□□□□ 0.08
ACTB-204ENST00000425660 RPRD1AQ96P16 312 aaPredicted RBP15.55■□□□□ 0.08
ACTB-204ENST00000425660 KLF16Q9BXK1 252 aaPredicted RBP15.55■□□□□ 0.08
ACTB-204ENST00000425660 EMILIN2Q9BXX0 1053 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 ZNF334Q9HCZ1 680 aaPredicted RBP15.55■□□□□ 0.08
ACTB-204ENST00000425660 PLXNA4Q9HCM2 1894 aa15.55■□□□□ 0.08
ACTB-204ENST00000425660 LINC01553A4QN01 128 aa15.54■□□□□ 0.08
ACTB-204ENST00000425660 C2orf71A6NGG8 1288 aa15.54■□□□□ 0.08
ACTB-204ENST00000425660 F5H5T6 163 aa15.54■□□□□ 0.08
ACTB-204ENST00000425660 AP2A1O95782 977 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms